Pseudomonas plecoglossicida: RK21_03027
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Entry
RK21_03027 CDS
T03646
Name
(GenBank) outer membrane porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj01501
beta-Lactam resistance
ppj02020
Two-component system
Module
ppj_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RK21_03027
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RK21_03027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_03027
01504 Antimicrobial resistance genes [BR:
ppj01504
]
RK21_03027
Transporters [BR:
ppj02000
]
Other transporters
Pores ion channels [TC:
1
]
RK21_03027
Antimicrobial resistance genes [BR:
ppj01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
RK21_03027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AJG14535
LinkDB
All DBs
Position
3169224..3170564
Genome browser
AA seq
446 aa
AA seq
DB search
MPRPVALLLASALLAPPALADSAQSQSNGFVEDGRWSLLNRSVFDQRDYKHGGRNSAGRN
AYKPRDERSGKAEEWAYGLMGTFRSGFTQGLIGVGVDAHAYLGVQLDSGGGRVGKARLLG
VDNEGHPKNEYSRAGAALKLRMADTVLSYGEQRVKTPVFSSSDSRLLPETATGFFLDSTE
FDDLRLVAGHFNENTDRNASSHDQGFVVNYSNGRQGNSFDLAGVVWNPGAAFSGSLYTSR
YQDSWNQHYLGSTLSHALDERRSLTLDLNLYRTTDTGKALSGRIDNTTWSLVSRYDHGPH
GFSLGWQQVDGNTPFDYVTRGAIFIANAVQMSDFNAPNEKSWQARYDLNMGAYGVPGLNL
TALYVRGFDIDGTHVDPAGGYAYLGYGKGGKHWERDLEARYVVQSGKAKGTAFSLRHNVH
RGNTAQAELDGDQIRLAVEWPLGGGF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccctgtcgccctgctgctcgccagcgccctgctcgcgccccctgcgctggcc
gactccgcccaatcgcaaagcaacggttttgtcgaggatggccgctggagcctgctcaac
cgcagcgtattcgaccagcgcgactacaagcatggcgggcgcaacagtgccgggcgcaac
gcctacaagccgcgcgatgaacgtagcggcaaggccgaggaatgggcctatggcctgatg
ggcaccttccggtccggtttcacccaggggctgatcggtgtcggggtcgacgcccacgcc
tacctgggcgtgcaactcgacagcggcggcgggcgcgtgggcaaggcacgcttgctcggg
gtggataacgaggggcacccgaagaacgaatacagccgtgccggcgcagcattgaaactg
cgcatggccgataccgtgctgtcctacggtgagcaacgggtcaagaccccggtgttcagt
tcatccgacagccgcctgctacccgagacagcgaccgggttcttccttgacagcaccgag
ttcgacgacctcaggctggtggccgggcacttcaatgaaaacaccgaccgcaatgcatcc
agccacgaccagggcttcgtggtgaactactccaatggccgccaaggcaacagcttcgac
ctggccggcgtggtgtggaaccccggcgccgccttcagcggcagcctgtacacctcacgt
taccaggacagctggaaccagcattacctgggcagcaccctaagccatgccctggatgag
cgccgcagcctcaccctcgacctcaacctttaccgcaccaccgacaccggcaaggcgctg
tccgggcgcatcgacaacaccacctggagcctggtctcgcgttacgaccatgggccgcac
ggtttcagcctgggctggcagcaggtggacggcaacacgccattcgactacgtgacgcga
ggggcgatcttcattgccaacgcggtgcagatgtcggacttcaacgcgccgaacgaaaag
tcgtggcaggcgcgctatgacctgaacatgggcgcctacggcgtgccggggttgaacctg
acggcgttgtacgtgcgcgggttcgatatcgacggtacccatgtcgaccctgcgggaggg
tatgcctacctggggtatggcaaggggggcaagcattgggagcgcgacctggaggcacgc
tatgtggtgcagagcggcaaggccaaaggcaccgcgttttcgctgcggcataacgtgcat
cggggcaatacggcacaggcggagctggatggggaccagatacgcttggcggtggaatgg
ccgttggggggtgggttctga
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