Pseudomonas plecoglossicida: RK21_03297
Help
Entry
RK21_03297 CDS
T03646
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
RK21_03297
Enzymes [BR:
ppj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RK21_03297
Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RK21_03297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AJG14805
LinkDB
All DBs
Position
3455759..3457684
Genome browser
AA seq
641 aa
AA seq
DB search
MRSRLLHIASCLLLTAATCAAQAADLTLQRQYYDEAKRALAKGDKGPYLRYAQALSDYPL
TPYLAYDELTARLKTASNQEIEGFLAKHGDLPQANWMKLRWLRWLAERGEWNTFVKYYDP
KLNFTELDCLNGQYQLSHGLRAEGFATADKLWNVGKSQPATCDTLFGMWAAEGQLTEAKR
WQRTKLAAQARNYGLANNLVKTLTTLAPQGRLLVDVAQKPELLNQPSRFTPANEAMSDVV
SLGLRRLARQDPERAMALLDDYAQRMHFSRDEKVAIAREIGLTLARRYDPRALDLMTRYD
PELRDNTVSEWRLRLLLRLGRWEDAYELTRRLPQDLANSSRWKYWQARSLELAQPNNPQI
PLLYKTVARERDFYGFLAADRAQTPYQLNNKPLVLSPQLVNKVRNTPGIRRALEFHARGQ
IVEGRREWYHVSRHFTRDEMVAQARLGYDLRWYFPAIRTISQAQYWDDLDIRFPMAHRDT
LVREAKVRGLHSSWVFAITRQESAFMEDARSPVGASGLMQLMPATAKETARKFSIPLASP
AQVLNPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWLKGAKHLSFDVWVES
IPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYFDDM
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccgcctgttacatattgcatcctgcctgctgctcaccgccgccacctgcgcg
gcgcaggccgccgatcttaccctgcaacgccagtactatgacgaggccaagcgcgcgctg
gccaaaggcgacaaaggcccatacctgcgctatgcccaggccctcagcgactacccgctg
acgccctacctggcctacgacgaactcaccgcccgcctgaaaaccgcgagcaaccaggaa
atcgaaggcttccttgccaagcatggcgacctgccccaggccaactggatgaaactgcgc
tggttgcgctggctggccgaacgcggcgaatggaacactttcgtcaagtactacgacccc
aagctcaacttcaccgaactggactgcctcaacggccagtaccagctcagccacggcctg
cgcgccgagggttttgccacggccgacaaactgtggaacgtcggcaagtcgcagccggct
acctgcgacacactgttcggcatgtgggcggccgagggccaactgaccgaggccaagcgc
tggcaacgcaccaagctggcggcccaggcgcgcaactacggcctggccaacaacctggtc
aagaccctgaccaccctcgcgccgcaggggcgcctgctggtagatgtggcgcagaaaccc
gagctgctcaaccagccgtcgcgcttcaccccggccaacgaagccatgtccgacgtggtc
agcctcggcctgcgccgcctggcccgacaggacccggagcgggccatggcgctgctcgac
gactacgcccagcgcatgcacttttcacgcgacgagaaggtggccatcgcccgcgaaatc
ggcctgaccctggcgcgccgctacgacccgcgcgcgctcgacctgatgacccgttacgac
cccgagctgcgtgacaataccgtcagcgaatggcgcttgcgcctgctgctgcgcctgggc
cgctgggaagacgcctacgagctgacccgccgcctgccccaggacctggccaacagcagc
cgctggaagtactggcaggcgcgcagcctggagctggcgcaaccgaacaacccacagatc
ccgctgctgtacaagaccgtggcgcgcgaacgtgacttctacggtttcctcgccgccgac
cgggcacaaaccccttaccagctgaacaacaagccgctggtgctcagcccacagctggtc
aacaaagtccgcaacaccccgggcatccgccgtgccctggagttccacgcccgtggccag
atcgtcgaaggccgccgcgagtggtaccacgtcagccgacacttcacccgcgacgaaatg
gtcgcccaggcgcgcctgggctacgacctgcgctggtacttcccggccattcgcaccatc
agccaggcgcagtactgggacgacctggacatccgcttcccgatggcccaccgcgacacc
ctggtgcgcgaggccaaggtccgcggcctgcattcgagctgggtcttcgccattacccgc
caggaaagtgcgttcatggaggatgcccgttccccggtgggtgccagcggcctgatgcag
ttgatgccggccacggccaaggaaaccgcgcgcaagttcagtatcccgctggcatcaccg
gcgcaggtgctcaacccggacaagaacatccagctgggcgcggcctacctgagccaggtg
cacagccagttcaacggtaaccgggtgctcgcttcggcagcctacaatgccgggccggga
cgcgtgcgacagtggctcaaaggcgccaagcacctgagcttcgatgtgtgggtggagtcg
atcccgttcgacgaaacgcgccagtatgtgcagaacgtactgtcgtattcggtgatctac
gggcagaagctgaactcgccgcagccgctggtggattggcatgagcggtacttcgatgac
atgtga
DBGET
integrated database retrieval system
