Pseudomonas plecoglossicida: RK21_03360
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Entry
RK21_03360 CDS
T03646
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00300
Lysine biosynthesis
ppj00470
D-Amino acid metabolism
ppj01100
Metabolic pathways
ppj01110
Biosynthesis of secondary metabolites
ppj01120
Microbial metabolism in diverse environments
ppj01230
Biosynthesis of amino acids
Module
ppj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RK21_03360
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RK21_03360
Enzymes [BR:
ppj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RK21_03360
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AJG14868
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Position
3526201..3527433
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AA seq
410 aa
AA seq
DB search
MTAPFTLLAEAVRQHGSPLWAYDAGTIAERVEQLKVFDTVRFAQKANPNLHVLRLMRAHG
LVLDAVSLGEMERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLRQ
LGERSPGHRVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELGEALACVKAHGLHLVGVH
MHIGSGVDYQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSSDTPVDLQRYARTWA
VARKEIEAMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFNDLMRPA
MYGAYHRMTLLDADGQPVDRPRQPTVVAGPLCESGDVFTQDDQELTPHDLPQAQVGDLLV
IHDAGAYGASMSSNYNSRPLLPEFLIEDGALRMIRRRQTVQDLLGLEAGF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacccttcactcttctggccgaggctgtccgccagcacggctcgccgctgtgg
gcctatgacgccggcaccatcgccgagcgtgtcgaacagctgaaggtgttcgacaccgtg
cgcttcgcccagaaggccaaccccaacctgcatgtgctgcgcctgatgcgcgcccacggc
ctggtgctggacgcagtgtcgctgggcgaaatggagcgggcctttgccgcgggcgccagc
gtggatggcgaccctgccggcgtggtgctgacctgcgacgcactggaccggccgaccctg
gagcgggtggtggcctcgaagatcgaagtcaacgccggttccatcgacatgctgcgccaa
ctgggtgaacgctcgcccggccaccgcgtgtggatccgcatcaaccccggcttcggccat
ggccacagccgcaagaccaacaccggcggcgagaacagcaagcacggcatctggcacgaa
gagctgggcgaagcgctggcctgcgtgaaagcccatggcctgcacctggtaggggtgcac
atgcacatcggctcgggagtggattaccagcacctggagcaagtggcccgctcgatgatc
gagctgatcggccgcctgggcgtggacatcgaggcgttctccattggcggcgggctttcc
accccgtaccgcagcagcgacacgccggtcgacctgcaacgctacgcccggacctgggcc
gtggcccgcaaggaaatcgaagcgatgctgggccaccccgtgcgcatggagatcgagccg
gggcgcttcctggtggcggaatcgggctacctggtggccgaggtacgcgctgtgaagcag
gtgggccgcaacaccttcgtcatgatcgacgccggtttcaacgacctgatgcgcccggcg
atgtacggggcctaccaccgcatgaccctgctcgacgccgacggccagccggttgaccgc
ccacggcagccgaccgtggtggccgggccgctgtgcgagtcgggtgatgtgtttacccag
gatgaccaggaactgaccccgcacgacctgccccaggcgcaggtgggtgacctgctggtg
atccacgacgccggggcctacggcgcgtcgatgtcgtcgaactacaacagccggccgttg
ctgccggagttcctgatcgaggatggggcgctacggatgattcgccgcaggcagacagtg
caggacctgctgggcctggaggcgggcttctag
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