Pseudomonas plecoglossicida: RK21_03473
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Entry
RK21_03473 CDS
T03646
Name
(GenBank) DNA polymerase III subunit delta
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03030
DNA replication
ppj03430
Mismatch repair
ppj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RK21_03473
03430 Mismatch repair
RK21_03473
03440 Homologous recombination
RK21_03473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppj03032
]
RK21_03473
03400 DNA repair and recombination proteins [BR:
ppj03400
]
RK21_03473
Enzymes [BR:
ppj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RK21_03473
DNA replication proteins [BR:
ppj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RK21_03473
DNA repair and recombination proteins [BR:
ppj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RK21_03473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
AAA_5
nSTAND3
iSTAND
Mg_chelatase
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
AJG14981
LinkDB
All DBs
Position
complement(3654058..3655044)
Genome browser
AA seq
328 aa
AA seq
DB search
MAEAYPWQQALWQQLAGRSQHAHAYLLHGPQGIGKRALAERLMARLLCQQPQALEACGAC
KSCLLLKAGSHPDNFVLEPEEADKPIKVDQVRELVAFVVQTAQLGGRKVVLIEPVEAMNV
NASNALLKSLEEPSGDTVLLLVTHQPSRLLPTIKSRCQQVACPQPSLAQSQAWLAGALPD
SDETERDELLTLAAGSPLMAVSLQAQGVREQRALVTDGVKKLLKQQQSPSQLADAWNGVP
LLLLFDWFCDWAHLILRYQLTQDEEGLGLADMRKVVQYLAQKSHQAKVLEVQAWILEQRQ
KVLGKANLNRALLLESLLAHWLQLPGAR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaggcctatccctggcagcaggccctctggcagcagctggccggccgcagccag
cacgctcacgcctacctgctgcatgggccgcagggtatcggcaagcgggccttggccgag
cgcctgatggcccgcctgctgtgccagcagccccaggccctggaggcctgtggcgcgtgc
aagtcctgcctgctgctcaaggccggcagccacccggacaacttcgtactcgagcccgaa
gaagctgacaagcctatcaaggtagatcaggtacgcgagctggtggccttcgtggtgcag
accgcgcagctgggtgggcgcaaggtggtactgatcgagccggtggaggcgatgaacgtc
aacgcctccaacgccctgctcaagagcctcgaagaaccctccggtgataccgtgttgctg
ctggtcacccaccagcccagccgtctgttgccgaccatcaagagccgttgccagcaggtc
gcctgcccgcagcccagcctggcccagagccaagcctggctggccggcgcgctgcccgac
agtgacgagaccgagcgcgacgagttgctgaccctggctgccggttcgccgctgatggcg
gtcagcttgcaggcgcaaggcgtgcgagagcagcgtgcgctggtcaccgacggggtgaag
aagctgctcaagcagcagcaatcgcccagccagctggccgatgcctggaacggtgtgccg
ttgttgctgctgttcgactggttctgcgattgggcgcacctgattctgcgctaccaattg
acccaggacgaggaagggctaggcttggccgatatgcgcaaggtggtgcagtacctggcg
cagaagagccaccaggccaaggtgctggaggtgcaggcatggatcctggagcagcgccag
aaggtgctgggcaaggccaacctcaaccgcgccctgctgcttgaatcgctgctggcccac
tggctgcagttgccgggcgcccgctga
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