Pseudomonas plecoglossicida: RK21_03616
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Entry
RK21_03616 CDS
T03646
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00521
Streptomycin biosynthesis
ppj00523
Polyketide sugar unit biosynthesis
ppj00541
Biosynthesis of various nucleotide sugars
ppj01100
Metabolic pathways
ppj01110
Biosynthesis of secondary metabolites
ppj01250
Biosynthesis of nucleotide sugars
Module
ppj_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RK21_03616
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RK21_03616
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RK21_03616
Enzymes [BR:
ppj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RK21_03616
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AJG15124
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Position
complement(3807004..3807558)
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AA seq
184 aa
AA seq
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MYQMKATKQVIPEVILFEPQVFGDNRGFFLESFNQRVFDEVVGRPVTFVQDNHSRSVKGV
LRGMHYQIQQPQGKLVRVVQGEVFDVAVDMRKSSPTFGKWVGVHLSAENKHQLWVPEGFA
HGFVVLSETAEFLYKTTDFYAPQFDRSLAWNDPTVGIQWPFDGEPSLSAKDQKASAFADV
DAFA
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaatgaaagcaacaaagcaagtcatcccggaggtcatcctttttgaaccccag
gtatttggcgataaccgtggtttcttcctggaaagcttcaaccagcgggtgttcgatgag
gtggtgggtcgcccagtaacctttgttcaagacaaccactcccggtcggtgaaaggtgtg
ctcagagggatgcactaccagatccagcaaccccagggcaaactggttcgcgttgtacag
ggtgaagtcttcgacgttgccgtcgacatgcgtaaaagctccccaaccttcggcaagtgg
gtcggtgttcacctgagcgccgaaaacaagcatcagctgtgggtgccggagggctttgcc
catggctttgtggtgctttccgaaaccgccgagttcctatacaaaaccacagacttctac
gcgccgcagtttgatcgcagcctggcgtggaacgacccgactgtcggcattcaatggccg
ttcgatggggaaccctcactgtcggccaaagaccagaaggccagcgcatttgcggatgtc
gacgctttcgcctga
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