Pseudomonas plecoglossicida: RK21_03750
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Entry
RK21_03750 CDS
T03646
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppj03009
]
RK21_03750
Enzymes [BR:
ppj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RK21_03750
Ribosome biogenesis [BR:
ppj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RK21_03750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_25
Methyltransf_31
Cons_hypoth95
MTS
Methyltransf_11
Methyltransf_23
Methyltr_RsmB-F
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_15
PCMT
Methyltransf_4
Ubie_methyltran
PrmA
TPMT
DREV
Motif
Other DBs
NCBI-ProteinID:
AJG15258
LinkDB
All DBs
Position
complement(3944275..3945633)
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AA seq
452 aa
AA seq
DB search
MSKKKSNSGLRFQPAGGNRSPQVPVGKKQRLEIERLAGDGRGIAFHEGRTWFVSGALAGE
AVEARVLNARGKVVEARLERLLQASPERRQAPCRYYERCGGCNLQHLPHEAQLALKQRTL
AEQLQRVASVQPEEWAAPLSGPEFGYRRRARVAVRWDAKARQLEVGFRAEASQDIIAIDD
CAVLVQPLQSILRHLPTVLRSLSKPQALGHVELFSGTAEALLVRHVAPLPAEDLARLQAF
CEQANAQLWLQGEGEPAPVDPAAQLGFALAPWQLELAWRPGDFVQVNAQVNTAMIEQALA
WLAPQADERVLDLFCGLGNFALPLARQAREVVAVEGVQAMVDRAAANARNNNVHNARFFQ
ADLSQPLAGAGWAAEGFSAVLLDPPRDGAFEVVQGIARLKARRLVYVSCNPATLARDAQV
LVGQGYRLKRAGILDMFPQTAHVEAMALFEAG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaaaaaagcaacagcggcctgcgcttccagccggctggcggcaaccgcagc
ccccaggtcccggtgggcaagaagcagcgcctggaaatcgagcgcctggccggtgacggc
cggggcattgccttccacgaagggcgcacctggttcgtcagcggcgccctggccggtgag
gccgtcgaggcgcgggtgctcaatgcccgtggcaaagtggtcgaggcccgcctggagcgc
ctgctgcaggccagccccgaacgccgtcaggcaccgtgccggtattacgagcgttgcgga
ggctgcaacctgcagcacctgccgcacgaagcgcagctggcgctcaagcagcgcaccctg
gcagagcagcttcagcgggtggccagcgtgcagcccgaggaatgggccgcaccgctgagt
gggccggagttcggctaccggcgccgcgcccgcgtggccgtgcgctgggacgccaaggcg
cgtcagctggaggtcggcttccgtgccgaagccagccaggacatcattgccatcgacgat
tgcgcggtgctggtacagcccttgcagtcgattctgcgccatttaccgaccgtgctgcgc
tcgctgagcaagccgcaggcgctgggccatgtggaactgttcagcggtactgccgaggcg
ctgctggtgcgccatgtcgcgccgttgcccgccgaagacctggccaggctgcaggcgttc
tgcgaacaggccaatgcccagttgtggctgcagggcgaaggggagccggcgccagtggac
ccggccgcgcagctgggctttgccttggcgccttggcagttggaactggcctggcgccca
ggtgacttcgtacaggtgaatgcccaggtcaacacggcaatgatagagcaggcgctggcc
tggctcgcaccgcaggccgacgagcgcgtgctggacctgttctgcggcctgggcaacttc
gccctgccactggcccggcaggcgcgcgaggtagtggcagtggaaggagtgcaggccatg
gtcgatcgggccgcggccaatgcccggaacaacaatgtgcataacgcacggttttttcag
gccgatttatcgcagcctttggcgggtgccggatgggccgccgagggcttttctgcggta
ctcttggatccaccgcgcgacggtgctttcgaggtggtgcaaggcatcgcccgcctcaag
gccagaaggctggtctatgtatcgtgcaacccggccacgctggcgcgagacgcgcaggtg
ctggtcggccaggggtaccggttaaaaagggccgggattctcgacatgtttcctcagacg
gcgcatgtcgaggccatggcgttattcgaagcgggctag
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