Pseudomonas plecoglossicida: RK21_03781
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Entry
RK21_03781 CDS
T03646
Name
(GenBank) peptigoglycan-binding protein LysM
KO
K06194
lipoprotein NlpD
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
RK21_03781
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GFIT
Motif
Pfam:
Peptidase_M23
LysM
Biotin_lipoyl_2
RnfC_N
Biotin_lipoyl
DUF6927
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
AJG15289
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Position
complement(3972147..3972992)
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AA seq
281 aa
AA seq
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MGHTVIRQRKDGSGFTLLVIALAMGTLLVGCSSTSSNSARVVDRNNTVPKRPAVTTGQYI
VKPGDTLFSIAFRYGWDYKELAARNGIAAPYTIRPGQAIRFSSGSTGSTTVVSSPSSSSK
TTVIRRPVGSTSTPPGNTSKPATPAASSSATVPAAERAVGGWTWPANGVLIGKFASNGSL
NKGIDIAGDLGQPVFAASDGAVVYAGSGLRGYGELIIIKHSDTYVSAYGHNRRLLVREGQ
QVKAGQSIAEMGSTGTDRVKLHFEIRRQGKPVDPLQFLPRR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgggtcacacagtcattcggcagcgcaaggacgggtcgggtttcacgcttctggtgatt
gcactggccatgggcacgctactggtaggttgctcgagcaccagcagcaacagcgcgcgg
gtggtcgaccgcaacaacaccgtgcccaagcgcccggcagtaaccaccgggcagtacatc
gtcaaacctggcgatacgctgttctccatcgccttccgttatggctgggactacaaggag
ctggctgcgcgcaacggtatcgcggcgccctacaccattcgcccggggcaagcgattcgt
ttcagcagcggctctaccggcagcaccacggtggtgtccagcccgtcgtcgtcgagcaag
accacggtcatccggcggcctgtgggaagcaccagcacacctcctggcaacaccagcaaa
ccggccacgccggcagcctccagcagcgccacggtgcctgccgcggagcgtgcggtaggt
ggctggacctggcccgccaacggcgtgctgattggaaaattcgcttcaaacggtagtttg
aataaaggcattgatatcgccggtgatttgggacagcctgtttttgctgcgtctgatggt
gcagtggtgtacgccgggagtggcttgaggggctacggcgaactgatcatcatcaagcac
agcgatacctacgtcagtgcctacggccataaccgcaggctgttggttcgggaggggcag
caggtcaaggcagggcagtcgattgctgaaatggggtccacgggcacagatcgggtgaag
ctgcatttcgagattcgccgccagggcaaacccgtcgatccgctccagttcctgccacgt
cgttga
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