Pseudomonas plecoglossicida: RK21_03870
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Entry
RK21_03870 CDS
T03646
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RK21_03870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_03870
Transporters [BR:
ppj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RK21_03870
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
AJG15378
UniProt:
A0A099MWF2
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All DBs
Position
4061800..4062951
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AA seq
383 aa
AA seq
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MSVHKTALLGATACAVLASASLQAAEPPKALGPGEGRLDIVAWPGYIERGESDKAYDWVT
GFEKETGCKVSVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIAGKRVQPINTDLIPNW
KNIDPRLQNGGWYVVDKRVYGTPYQWGPNVLLYNTDVFKQAPTTWGVLFEPQNLPDGKPN
KGRVQAYDGPIYIADAALYLKTAKPELGIQDPYELSETQYKAVLELLRQQQPLIHRYWHD
ATVQMSDVKNEGVVASSSWGYMVNGLKAEKQPVASTIPKEGATGWADTTMLHSEAKHPNC
AYKWMDWSLQPKVQGDVAAWFGSLPAVPAACTGNELLGAEGCKTNGFDNFDKIAFWKTPQ
AQGGKFVPYSRWTQDYIAIMGGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgcacaagaccgcattgctcggcgcaaccgcctgcgccgtgctggccagcgcc
agcctgcaggctgccgaaccgcccaaggccctggggcccggcgagggccgcctggacatc
gtcgcctggcccggctacatcgagcgcggtgaaagcgataaggcctacgactgggtgacc
ggcttcgagaaggaaaccggctgcaaggtcagcgtcaagaccgccgccacctcggacgaa
atggtcagcctgatgaccaagggcggctacgacctggtcaccgcctcgggagatgcctcg
ctgcggctgatcgcgggcaagcgggtacagccgatcaacaccgacttgatccccaactgg
aagaacatcgacccacggctgcagaacggtggctggtacgtggtcgacaagcgggtctac
ggcaccccgtaccaatggggcccgaacgtgctgctgtacaacaccgacgtgttcaagcag
gcgcccaccacctggggtgtgctgttcgagccgcagaacctgcccgacggcaagccgaac
aagggccgcgtgcaggcctacgatgggccgatctacatcgccgatgcggcgttgtacctg
aagacggccaaaccggaactgggcatccaggacccgtacgagctgagcgaaacacaatac
aaggccgtgctggaactgctgcgccagcaacaaccgctgatccaccgctactggcatgac
gccacggtgcagatgagcgacgtgaagaacgaaggcgtggttgcctccagctcctggggc
tacatggtcaatggcctcaaagccgaaaagcagcccgtggcctcgaccattcccaaggaa
ggcgcgaccggctgggccgacaccaccatgctgcacagcgaggccaagcaccccaactgt
gcctacaaatggatggactggtcgctgcagccgaaagtacagggtgacgtggcggcctgg
ttcggttcgttgccggcggtgccggcggcctgcaccggcaacgagctgctgggggccgag
ggctgcaagaccaacggtttcgacaacttcgacaagatcgccttctggaaaaccccgcag
gcccagggcggcaagttcgtgccgtatagccgctggacccaggattacattgcgatcatg
ggcgggcgctga
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