Pseudomonas plecoglossicida: RK21_03928
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Entry
RK21_03928 CDS
T03646
Name
(GenBank) lytic transglycosylase
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
RK21_03928
Enzymes [BR:
ppj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RK21_03928
Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RK21_03928
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
AJG15436
UniProt:
A0A099MU63
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All DBs
Position
4123042..4124499
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AA seq
485 aa
AA seq
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MFAHTALRQRCARWLFATGLFLLLGACVEKPSTLERVKEDGVLRVITRNSPATYFQDRNG
ETGFEYELVQHFAEDLGVKLQIETADNLDELYDSLGKPSGPVLAAAGLVTSERRKAQVRY
SHPYLEVTPQVIYRNGRTRPTNAKGLVGKKIMVLKGSSHADQLAELKKQYPGLEYEESDA
VEVVDLLRMVDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGDTRDQRWAVAAGEDNSLL
NEVNEFLDKAQKNGTLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPKYEKHFKSYAKVE
QVDWRLLAAIGYQESMWQPEVTSKTGVRGLMMLTQRTAQAMGVSNRLDPKQSIQGGAKYF
MKIKEELDDSIQEPDRTWFALAAYNVGTGHLEDARTLAKREKLNPNKWLDVKKMLPRLSQ
KQWYRQTKYGYARGGEPVHFVANIRRYYDILTWVTQPQLEGQVAEGSLHVPGVNKDKPAE
QSPPM
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcccacactgctttgcgccagcgttgcgccagatggcttttcgcaaccggactc
tttctgctgctcggtgcctgcgttgaaaaacccagcaccctcgagcgcgtgaaggaggat
ggcgtgctgcgcgtgatcacccgtaacagcccggccacctacttccaggaccgcaacggc
gaaaccggcttcgaatacgagttggtccagcatttcgccgaagatctgggcgtgaagctg
cagatcgagaccgccgacaacctcgacgagctgtatgacagcctcggcaagccctccggc
ccggtgctggcagcggccggcctggtcaccagcgaacggcgcaaggcccaggtcaggtac
tcccacccttatctggaagtgaccccacaggtcatctaccgcaacggccgcacgcgcccc
accaacgccaagggcctggtcggaaagaagatcatggtgctcaagggcagcagccatgcc
gaccagctggccgagctgaaaaagcagtacccgggcctggaatacgaggaatccgacgcc
gtcgaggtggtcgacctgctgcgcatggtcgatgaaggccagatcgacctgaccctggtc
gactccaacgagctggcgatgaaccaggtgtacttccccaacgtgcgggttgccttcgac
cttggcgacacccgcgaccagcgttgggcggtggcggccggtgaagacaacagcctgctc
aacgaggtcaatgagttcctcgacaaggcgcagaagaacggcaccctgcaacgcctgaag
gaccgctactacggccatgtcgacgtcctgggctatgtgggtgcctacactttcgcccag
cacctgcagcagcgcctgcccaagtacgagaagcacttcaagagctacgccaaggttgag
caggtggactggcgcctgctggccgccatcggctaccaggaatcgatgtggcagcccgag
gtcacctccaagaccggcgtgcgcggcctgatgatgctgacccagcgcaccgcccaggcc
atgggcgtgtccaaccgcctggacccgaagcagagcatccagggcggcgccaagtacttc
atgaagatcaaggaagagctcgacgacagcatccaggaaccggaccgcacctggttcgcc
ctggctgcctacaacgtcggcaccggccacctggaagacgcccgcaccctggccaagcgc
gagaagctcaacccgaacaagtggctggacgtgaagaagatgctgccgcggctgtcgcag
aagcagtggtatcgccagaccaaatacggctatgcacgtggcggcgagccggtgcatttc
gtggccaacatccgtcgctactacgacatcctcacctgggtgacccagccgcagctcgaa
ggccaggtggccgagggcagcctgcatgtgcccggggtgaacaaggacaagccggcggag
cagtcgccgccgatgtag
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