Pseudomonas plecoglossicida: RK21_03950
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Entry
RK21_03950 CDS
T03646
Name
(GenBank) DNA-binding transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppj03000
]
RK21_03950
Transcription factors [BR:
ppj03000
]
Prokaryotic type
Helix-turn-helix
Other families
RK21_03950
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AJG15458
UniProt:
A0A099MWX2
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Position
4147547..4148419
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AA seq
290 aa
AA seq
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MDRVRNLLEQIQGRLDELNKAERKVAEVILLNPQQATRFSIAALAQAAKVSEPTVNRFCR
SFGVSGYPELKLQLAQSLASGAAYVSRAVEADDDPAAYTQKIFASAIASLDSACQQLDPQ
QVSRAVDMMIQARQIHFFGLGASAPVALDAQHKFFRFNLAVSAHADVLMQRMLASVAHTG
DLFVIISYTGRTRELVEVARLARENGASVLGLTAAGSPLANACSLSLHIPLPEDTDIYMP
MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNASRYPIEDDELN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgcgaaacctcctggaacagatccagggccgcctcgacgagctgaacaag
gccgaacgcaaagtcgccgaagtcatcctgctcaatccgcaacaagccacccgtttcagc
atcgctgcgctggcccaggcggccaaggtcagcgaaccgaccgtcaaccgcttctgccgc
tcattcggcgtcagcggctaccccgagctcaagctgcagctagcgcagagcctggccagc
ggcgccgcctacgtcagccgcgcggtggaggctgacgatgacccggcagcctacacccag
aagatcttcgccagtgccatcgcctcgctcgacagcgcctgccagcagctcgacccgcaa
caggtcagccgtgccgtggacatgatgatccaggcccggcagatccacttcttcggcctg
ggcgcctcggccccggtggcgctggacgcccagcacaagttcttccgcttcaacctggca
gtatcggcccacgccgacgtgctgatgcagcgcatgctggcctcggtggcgcacaccggc
gacctgttcgtgatcatctcctacaccgggcgcacccgcgaactggtcgaggtggcccgc
ctggcccgggaaaacggcgcctcggtactgggcctgaccgctgccggttcgccactggcc
aatgcctgcagcctgagcctgcacattccgctgccggaagacaccgacatctacatgccg
atgacctcgcggatcatccagctgaccgtgctcgatgtgctggccaccggcatgaccctg
cgtcgcggcgtggacttccagcctcacctgcgcaagatcaaggaaagcctcaacgccagc
cgctacccgatcgaggacgacgagctcaactga
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