Pseudomonas plecoglossicida: RK21_03993
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Entry
RK21_03993 CDS
T03646
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RK21_03993
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppj01007
]
RK21_03993
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppj03016
]
RK21_03993
Enzymes [BR:
ppj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
RK21_03993
Amino acid related enzymes [BR:
ppj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RK21_03993
Transfer RNA biogenesis [BR:
ppj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RK21_03993
Prokaryotic type
RK21_03993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
AJG15501
LinkDB
All DBs
Position
4194830..4197676
Genome browser
AA seq
948 aa
AA seq
DB search
MDKTYQPHAIETSWYNTWESENYFAPQGAGESYTIMIPPPNVTGSLHMGHGFNNAIMDAL
IRFRRMQGRDTLWQPGTDHAGIATQMLVERQLEAKGQNRHDLGREKFLEKVWEWKDQSGG
NISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAI
SDLEVENHDEKGHLWNLRYPLADGAKTAEGKDYLVVATTRPETLLGDAAVAVNPNDERYQ
ALIGKFVELPLVGRRIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIFDK
NAFVLASAQAFNLDGSVNEQVDTRLPAQYANLDRFVARKQIVADLDAQGLLVSIDDHALK
VPKGDRSGTVIEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRDIQDW
CISRQLWWGHRIPAWYDEAGQVYVGRNEEEVRAKHNLGADVVLRQDDDVLDTWFSSGLWT
FSTLGWPEQTEFLKKFHSTDVLVTGFDIIFFWVARMIMLTMHLIKNEDGTPQVPFKTVYV
HGLVRDGQGQKMSKSKGNVLDPLDIVDGITLDALLEKRTSGMMQPKLAEKIAKQTKAEFP
EGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARYVLDKGEDCGQNG
EAYELSLADRWIISQLQRTEAEVTRQLEQFRFDLASQALYEFIWNQYCDWYLELSKPVLW
DENAPVERARGTRRTLVRVLEVALRLAHPFMPFITEEIWQRIAPLAGIEGKTIMLQPWPV
ANESRIDAAAEGDIEWLKELMVGLRNIRAEMNIGPGKPLPLFLKNANADDQRRLQENEAL
LKKLAKVESFTVLGDADEAPLSATALVGDLQVLVPMAGLIDKDAELARLNKEIQRLQGEV
ARVGGKLSNAAFVDKAPPAVIEKERAKLAESEQALANFTEQHARIAAL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggataagacctaccagccgcacgccatcgaaacttcctggtacaacacctgggagtcc
gagaactatttcgctccacaaggtgcaggcgagtcctacaccatcatgatcccgccgccg
aacgtgaccggcagcctgcacatgggccacgggttcaacaacgcgatcatggacgccctg
atccgtttccgccgcatgcaaggccgcgacaccctgtggcagccaggcaccgaccacgcc
ggtatcgccacccagatgctggtcgagcgccagctagaggccaagggccagaaccgtcat
gatctgggccgcgaaaagttcctggagaaggtctgggaatggaaggaccagtccggcggc
aacatcagccgtcagatccgccgcctgggctcgtcggtcgactggagccgcgagcgcttc
accatggacgacggcctgtccgaagcggtcaaggaagcattcgtgcgcctgcatgaagac
ggcctgatctaccgtggcaagcgcctggtcaactgggacaccaagctgcacacggccatc
tccgacctcgaagtggaaaaccacgacgagaagggccacctgtggaacctgcgctacccg
ctggccgacggcgccaagaccgccgaaggcaaggactacctggtagtcgccaccacccgt
ccggaaaccctgctgggtgacgccgccgtggcggtcaacccgaacgacgagcgctaccag
gcactgatcggcaagttcgtcgaactgccgctggtcggccgccgcatcccgatcatcgcc
gacgactactgcgaccccgagttcggtaccggctgcgtgaagatcaccccggcccacgac
ttcaacgactacgaagtcggcaagcgccacaacctgccgctgctgaacatcttcgacaag
aacgccttcgtgctggccagcgcgcaggccttcaacctcgacggcagcgtcaacgagcag
gtggacacccgcctgccggcccaatacgccaacctcgaccgcttcgtcgcacgcaagcag
atcgtcgccgacctggatgcccagggcctgctggtgagcatcgacgaccacgcgctgaaa
gtgccgaagggcgaccgttcgggcaccgtcatcgagccgtggctgaccgaccagtggtac
gtttccaccaagccgctggcagaacctgccatcgccgccgtggaagatggccgcatccag
ttcgtgcccaagcagtacgagaacatgtacttctcctggatgcgtgacatccaggactgg
tgcatcagccgacagctgtggtggggccaccgcatcccggcatggtacgacgaggccggc
caggtctatgtcggccgcaacgaggaagaagtgcgcgccaagcacaacctgggcgccgac
gtggtcctgcgccaggacgacgacgtactcgacacctggttcagctcgggcctgtggacc
ttctccaccctgggctggccggaacagaccgagttcctcaagaaattccactccaccgac
gtgctggtaaccggcttcgacatcatcttcttctgggttgcgcgcatgatcatgctgacc
atgcacctgatcaagaacgaggatggcaccccgcaggtaccgttcaagaccgtgtacgtg
cacggcctggtgcgtgacggccagggccagaagatgtccaagtccaagggcaacgtgctg
gacccgctggacatcgtcgacggcatcaccctcgacgccctgctggaaaaacgcaccagc
ggcatgatgcagcccaagcttgccgagaaaatcgccaagcagaccaaggccgagttcccc
gaaggtatcgccagctacggtaccgacgccctgcgcttcaccttctgctcgttggcctcc
accggccgcgacatcaagttcgacatgggccgcgtcgaaggctaccgcaacttctgcaac
aagatctggaacgccgcccgctacgtgctggacaagggcgaagactgcggccagaacggc
gaggcctacgagctgtcgctggccgaccgctggatcatctcgcagctgcagcgtaccgaa
gccgaagtgacccgccagctggagcagttccgcttcgacctggccagccaggcgctgtac
gagttcatctggaaccagtactgcgactggtacctggagctgtccaagccggtgctgtgg
gacgagaacgccccggtcgagcgcgcccgtggcacccgccgcaccctggtgcgcgtgctg
gaagtggcgctgcgcctggcgcatccgttcatgccgttcatcaccgaagaaatctggcag
cgcatcgcgccgctggccggcatcgaaggcaagaccatcatgctgcagccatggccggtg
gccaatgaaagccgcatcgatgctgccgccgaaggcgacatcgagtggctcaaggagctg
atggtcggcctgcgcaacatccgcgctgaaatgaacatcggcccgggcaagccgctgccg
ctgttccttaagaacgccaacgccgacgaccagcgtcgcctgcaggaaaacgaagccctg
ctgaagaagctggccaaggtcgaatcgttcaccgtactgggcgatgccgacgaagcgccg
ctgtcggccaccgccctggtcggtgacctgcaagtgctagtgccaatggccggcctgatc
gacaaggatgccgagctggcgcgcctgaacaaggaaatccagcgcctgcagggtgaagtg
gcacgcgtgggtggcaagctgtccaacgccgccttcgtcgacaaggcaccacctgccgtg
atcgagaaggaacgcgccaagctggccgagtccgaacaggccctggccaacttcaccgag
cagcatgcgcggattgcagcgctgtaa
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