Pseudomonas plecoglossicida: RK21_04053
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Entry
RK21_04053 CDS
T03646
Name
(GenBank) extracellular solute-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj02010
ABC transporters
ppj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RK21_04053
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RK21_04053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_04053
Transporters [BR:
ppj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
RK21_04053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
PDDEXK_2
Motif
Other DBs
NCBI-ProteinID:
AJG15561
UniProt:
A0A0B5KIR8
LinkDB
All DBs
Position
4251351..4252961
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AA seq
536 aa
AA seq
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MQRAFMKSLPLRLALAALVLGSATQLAAKPLVVCTEASPEGFDVVQYTTGVTFDATSEAL
FNRLVDFKPGTTDVQPALAERWDISPDGLTYTFHLRQGVKFHKTDYFTPTREFNADDVLW
SLRRQLDPAHPWHDKTSVGYPYFESMSFKSLLKSVDKTDDHTVVITLTRPEAPFLRDMAM
GFTSIYSAEYGDQLLKAGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPAD
ALIFAIATDSNVRLQKLRANECQVALYPKPEDVPTIKADPKLKVAETEALVTGYIAMNTQ
HKYLSDVRVRKAINMAFDRQTHVDQLFGKDNALVGVNPYPPTMLGYNTTNQNPPRDLAKA
RALLKEAGVPEGTVITLFTRNGGGMTNPNPRLSAEMLQADLKQVGLKLDIRVMEWAEMLR
RAKNGEADLVSTGWAGDNGDPDNFLTPLLSCEAAKNGENYARWCNPQFQELITRARQMTD
DNERRWVYAEALRVYDDDQPWISMAHPKVFAAMRDNVEGYVISPLANNNFATTKVK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagctttcatgaaatcgctaccgctacgcctcgccctggcagcgctggtactg
ggtagcgccacgcaactggcggccaagccgctggtagtgtgcaccgaggccagcccggaa
gggttcgacgttgtccagtacactacgggggtcaccttcgatgccacctccgaagcgctg
ttcaaccgcctggtcgacttcaagcccggtaccaccgatgtccagccggccctggccgaa
cgctgggacatctcaccggacggcctgacctacaccttccacctgcgccaaggggtgaag
ttccacaagaccgactacttcacgcccactcgcgaattcaatgccgatgacgtgctgtgg
agcctgcgccgtcagctcgacccggcgcacccgtggcacgacaagaccagcgtcggctac
ccgtacttcgaaagcatgtccttcaaaagcctgctcaagtcggtggacaagaccgatgac
cacaccgtggtgatcaccctcactcgcccggaagcaccgttcctgcgggacatggccatg
ggcttcacctcgatctactccgccgaatacggcgaccagttgctcaaggccggcaagacc
gccgagctgaacagcaagccgatcggcactggcccgttcatcttccagcgttacaacaag
gacgcccaggtccgcttcaaacccaacccggactacttccgcggcaagcccccggccgac
gccctgatattcgccatcgccaccgacagcaacgtgcgcctgcaaaagctgcgcgccaac
gaatgccaggtggcgctgtaccccaaaccggaggacgtgccgacgatcaaggccgacccc
aagctcaaggtcgccgagaccgaagcgctggttaccggctatatcgccatgaacacccag
cacaagtacctcagcgatgtgcgcgtgcgcaaagccatcaacatggccttcgaccgccag
acacacgtcgaccagctgtttggcaaggacaacgcgctggtgggcgtgaacccgtacccg
ccgaccatgctcggttacaataccaccaaccagaacccgcctcgggacctggccaaggcc
cgcgccctgctcaaggaagctggcgtaccggaaggtaccgtgatcaccctgttcacccgc
aacggcggcggcatgaccaaccccaacccacgcctgtccgccgagatgctgcaggccgac
ctgaaacaggtcggcctgaagctggatatccgcgtgatggaatgggccgaaatgctgcgt
cgtgccaagaacggcgaagccgacctggtctccaccggctgggcaggcgacaacggtgac
ccggacaacttcctcaccccactgctcagctgcgaggccgccaagaacggcgagaactac
gcccgctggtgcaatccgcagttccaggaactcatcacgcgcgcacggcagatgacggat
gacaatgagcgccgatgggtctatgccgaggctttaagggtgtacgatgacgaccaaccc
tggatcagcatggcccaccccaaggtgttcgccgccatgcgtgacaacgtggagggctac
gtgatcagccctctggccaacaacaacttcgccaccaccaaggtgaagtag
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