Pseudomonas plecoglossicida: RK21_04086
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Entry
RK21_04086 CDS
T03646
Name
(GenBank) radical SAM protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppj03009
]
RK21_04086
Enzymes [BR:
ppj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
RK21_04086
Ribosome biogenesis [BR:
ppj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RK21_04086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AJG15594
LinkDB
All DBs
Position
complement(4289463..4290599)
Genome browser
AA seq
378 aa
AA seq
DB search
MTGKINLLGLTLQEMEKFFESIGEKRFRAGQVMKWIHHYGVDDFAAMTNVGKALREKLEA
VAEIRGPEVVSEDISADGTRKWVVRVASGSCVETVYIPTDDRGTLCVSSQAGCALDCSFC
STGKQGFNSNLTAAEVIGQVWLANKSFGTVPAKIDRAITNVVMMGMGEPLLNFDNVIAAM
KIMMEDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDELRNKLVPINKKY
PLKMLLESCMGYMSTLGGKRVLTIEYTLLKDVNDQPEHAAQMIELLRDVPCKINLIPFNP
FPHSGYERPSNNAIRRFQDLLHHGGFNVTTRTTRGDDIDAACGQLVGQVNDRTRRSERYI
AVRQLSADAELQDSPASH
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgactggcaagatcaacctgttgggcctgaccctgcaggaaatggaaaaattcttcgag
tcgatcggagagaagcgttttcgtgccggtcaggtcatgaaatggattcaccactatggc
gtcgacgatttcgccgccatgaccaatgtcggcaaggccttgcgcgaaaagctcgaggcc
gttgccgagattcggggcccggaagtggtcagtgaagacatttccgccgacggtacccgc
aagtgggtggtccgcgttgcctccggcagctgcgtcgagaccgtctacatccccaccgac
gatcgcggcaccctgtgcgtgtcgtcgcaagccggctgtgccctggactgcagcttctgc
tccaccggcaagcaaggcttcaacagcaacctcaccgccgccgaagtgatcggccaggtg
tggcttgccaacaaatccttcgggaccgttccggccaagatcgaccgcgccattaccaac
gtggtcatgatgggcatgggcgaacccctgctgaatttcgacaatgtcatcgccgccatg
aagatcatgatggaagatctgggctatggcatttccaagcgtcgcgtcaccctgtccacc
tcgggcgtggtgccgatgatcgacgagctggccaagcacatcgacgtgtcgctggccctg
tcgctgcacgcgccgaacgacgaactgcgcaacaagttggtaccgatcaacaagaagtac
ccgctgaagatgctgctggaatcgtgcatgggctacatgtccaccctgggtggcaagcgc
gtgctgaccatcgagtacaccctgctcaaggacgtcaacgaccagcctgagcatgctgcg
caaatgatcgagctgctgcgcgacgtaccctgcaagatcaacctgattccgttcaacccg
ttcccgcactcgggctacgagcggccgagcaacaacgccattcgccgcttccaggatctg
ttgcaccacggtggcttcaacgtcaccacccgcaccacccgtggtgatgacatcgacgct
gcctgtggtcagctggtcggccaggtcaacgaccgcacccgccgcagcgagcgctacatc
gctgtgcgccagctgtccgcggacgccgagctgcaagacagccccgccagccactga
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