Pseudomonas plecoglossicida: RK21_04123
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Entry
RK21_04123 CDS
T03646
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppj03016
]
RK21_04123
Enzymes [BR:
ppj01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
RK21_04123
Transfer RNA biogenesis [BR:
ppj03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RK21_04123
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_18
Rhodanese
AAA_22
AAA_16
Zeta_toxin
AAA_30
PAXNEB
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJG15631
LinkDB
All DBs
Position
4321647..4322759
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AA seq
370 aa
AA seq
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MRPDCTDFRQLFLDDVPMMDMRAPVEFAKGAFPGAVNLPLMNDQERQKVGTCYKQKGQAE
AIVLGHKLVSGEIKQARLEAWAKFAEDHPEGYLYCFRGGLRSHLVQKVLRDEKGIHYPLV
EGGYKAMRHFLLETTQQAVAQCDFVLVGGLTGTGKTEVLHLLDNELDLEGYANHRGSSFG
KRATAQPAQIDFENRLAIDVLKKRARGIEQFVLEDEGRIVGSCTVPLELYQGMQQYPLVW
LEDSLANRVERILRDYVIDLSAEFVSLHGEEDGRRLFAETLLQSMGRIQKRLGGERHQRL
SEILRQALDEQQRSGSVELHRVFIESLLSEYYDPMYAYQRAAKAERIEFAGDAVEVREYL
KARALREPRK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgactgcaccgacttccgccagttgttcctcgacgacgtgccgatgatggac
atgcgtgcacctgtcgaatttgccaagggcgccttcccgggtgccgtcaacctgccactg
atgaatgaccaagagcggcaaaaggtcggcacctgctacaagcagaagggccaggctgaa
gccatcgttctgggccacaagctagtcagcggtgagatcaagcaggcacgtctggaggcc
tgggcaaagttcgccgaggatcacccggaaggctacctgtactgcttccgtggcggcctg
cgctcgcatcttgtccagaaagtgctgcgcgatgagaagggcatccactaccccctcgtc
gagggcggctacaaggccatgcgccacttcctgctggagactacccaacaggcggtcgcg
caatgtgatttcgtgctagtgggcggcctgaccggcaccggcaagaccgaagtgctgcac
ctactggacaacgagctggacctggagggctacgccaaccatcgcggttccagctttggc
aagcgcgccactgcacagccagcgcagatcgacttcgagaacaggctggccatagacgtg
ttgaaaaaacgcgcccggggtatcgagcagttcgtgctggaagacgaaggccgaatcgtg
ggcagctgcaccgtaccgctggagttgtaccagggcatgcagcaatacccgctggtgtgg
ctggaagacagtttggccaaccgcgtggagcgtatcctgcgcgactacgtgatcgacctg
agcgccgagttcgtcagcctgcatggtgaagaagatggccggcggctatttgccgagaca
cttctgcagagcatgggcaggattcaaaagcgcctcggcggcgagcgccatcagcggctg
tcggaaatcctgcgccaggcgctggacgagcagcagcgcagtggttcggtagagttgcac
cgggtcttcatcgaaagcttgctgagcgagtattacgacccgatgtatgcctaccagcgt
gcagcgaaagcagagcgtatcgagtttgccggggatgcggtggaagtgcgcgagtatctc
aaggcccgggcgctgcgcgaaccacgcaagtaa
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