Pseudomonas plecoglossicida: RK21_04307
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Entry
RK21_04307 CDS
T03646
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RK21_04307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppj03400
]
RK21_04307
Enzymes [BR:
ppj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RK21_04307
DNA repair and recombination proteins [BR:
ppj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RK21_04307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJG15815
LinkDB
All DBs
Position
complement(4509207..4509833)
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AA seq
208 aa
AA seq
DB search
MILSDLSPEAYREATEYLAALDPDWSRHIEATGPCLHQATPGREPYEVLVRAIAYQQLHA
RAAEAILGRLLALFPEAAFPGPEQLLAVTPETMRACGFSASKMATIQGIAQGRLDGLVPS
REEALAMADEALIERLVALRGVGRWTVEMLLIYSLARSDVLPVDDFGVREGYRRLKGLDK
APTPAQMRSLGGGWRPYRTVAAWYLWRA
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgtccgacctatcgcctgaagcctaccgtgaggccactgaataccttgcggcg
ctcgacccggactggtcgcggcatatcgaggcgaccgggccttgcctgcaccaggccacg
ccggggcgtgagccttacgaagtgctggtgcgagcgattgcctaccagcagttgcatgcc
cgtgctgccgaggcaattcttgggcgcttgctggcgttgttcccggaggctgcgttccca
gggccggagcagttgttggcggttacaccggaaaccatgcgcgcctgtggtttttccgcg
agcaagatggcgacgatccagggtattgcccaaggccggctggatggcctggtgccgagc
cgggaagaggcgctggccatggctgacgaggcgttgatcgaacggctggtggcgttgcgc
ggggtagggcggtggacggtggagatgttgctgatctacagcctggcgcgttcggacgtt
ctgccggtcgacgattttggcgtgcgcgaggggtatcggcggctgaaggggctggacaag
gcgccgacgccggcgcaaatgcgttcgctgggtggcggctggcggccataccgcaccgtg
gcggcctggtacctgtggcgggcttga
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