Pseudomonas plecoglossicida: RK21_04343
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Entry
RK21_04343 CDS
T03646
Name
(GenBank) diguanylate phosphodiesterase
Organism
ppj
Pseudomonas plecoglossicida
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_3
PAS_4
PAS_8
GntR
T4_Cef
Motif
Other DBs
NCBI-ProteinID:
AJG15851
UniProt:
A0A0B5KJJ8
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All DBs
Position
4542615..4546445
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AA seq
1276 aa
AA seq
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MTNLTHPSSLRSAPQAPVASLRGSIKGALALLALILLGLLLWQLFAQFNHTQADLRKQSL
DATAELADHLSLNMALKAQQAVNVVQPYVKAPTPSALPSLLGTLRERLPALQSMAWLDAT
GQVQADSLAGSPDRHLLDELLRLNQGSPYFFTNSGDNRTVYLLLRQATEQGRGYWLLRLS
PDYYRTLTLHLDGAGHPLWLLENSRNGEVLQSHAPAVTSNEPLQSVMLAFIDNSTWQLRG
LFDAKLAQQKLLPALLGKCLLVLFCALLPMLALVNMRRRQRALQDDRRRYQEIFEGTGVA
LCVLDLSSLPGQLDRYHLRNRAALKHSLALDPNLRRSLLLELKITEINQVARQLLNIDSH
EGAWQRLIDGTGDGRDSIGMQLIDALIEQRPLLELEVRLPAPLGGELHLWLMARLPQQRR
DYQAVILSISDITSRKQVELSLLERESFWSDVVRTVPDQLYVQDVLSQRMIFSNRHLGQT
LGYDRTELAHMGERFWELLLHPEDATHYQALRQQQRDSGHDQPLHCQLRFRHRDGGWRCY
DIREQVLTRDADGLVTRIIGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTDNLL
QLNYVSPSVQSVLGYQADWIFANGWQSIIANPSQLTGIYSLMERVSKAMGDPAQLAQLRN
QLPTQLFLFDCLRADGRKIPIELRLVLVWDDEERFEGVLGVGRDISQQRRAEKDLRMAAT
VFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTVDEQQEGHLRYVVKQ
LYQRGSWEGEMWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRIHRL
AYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLK
DMAQRLLACVDNDDTVARMGGDEFTLLLQPRATREMALNRAIHVAENILGSLVRPFVLEN
REFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLEL
ESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLV
VDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIATILEETGLPPACL
ELELTESILMREVNEAMQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFV
DGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPA
HQFEAQFANEKLFMFH
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaatcttactcatccgtcgtcattgcgttccgcgccacaggcgcccgtcgcctcg
ctgcgcgggtcgatcaagggtgcgctggcgctgctggccctgatcctgctgggcctgctg
ctgtggcagctgttcgcccagttcaaccatacccaggctgacctgcgcaaacagagcctg
gacgccaccgccgaactggccgaccacctgagcctgaacatggccctcaaggcgcaacag
gccgtgaatgtggtgcagccctacgtcaaggcgccgacgccctcggccttgcccagcctg
ctgggcacccttcgcgagcgcctcccggccctgcagagcatggcctggctggacgctacc
ggccaggtgcaggccgacagcctggccggcagccccgaccgccatttgcttgacgagctg
cttaggctgaaccagggcagcccgtacttcttcaccaattcgggcgacaaccgcaccgtc
tacctattgctacgccaggccaccgaacaaggccgcggctactggctgctgcgcctgtcg
ccggactactaccgcaccctcaccctccacctggatggtgccggccacccgctgtggctg
ttggaaaacagccgcaacggcgaggtactgcaaagccatgcgccggccgttaccagcaac
gaaccgctgcaaagcgtgatgctggctttcatcgataacagtacctggcagttgcgcggc
ctgttcgacgccaagctggcccaacagaagctgctgccggcgctgctcggcaaatgcctg
ctggtgctgttctgcgccctgctgccgatgctggccctggtcaacatgcgccgccgccaa
cgggcgctgcaggacgaccgccggcgctatcaggaaattttcgaaggcaccggcgtggcc
ttgtgtgtgctcgacctgtccagcctgcccggccaactcgaccgttaccacctgcgcaac
cgtgccgcgctcaaacacagcctggccctggaccccaacctgcgccgctcgctgctgctg
gagctgaagatcaccgagatcaaccaggtggcccgccaactgttgaacatcgacagccac
gaaggtgcctggcagcgcctgatcgatggcactggcgatggccgcgacagcatcggcatg
caactgatcgacgcgctgatcgagcagcgcccgctgctggagctggaggtgcgcctgccg
gcgccgctgggtggcgagctgcacctgtggctgatggcccgcctgccgcagcagcgccgc
gactaccaggcggtcatcctcagcatcagcgacatcaccagccgcaagcaggtggagctg
tcgctgctggagcgtgaaagcttctggtcggacgtggtgcgcaccgtgcccgaccagttg
tatgtgcaggacgtgctcagccagcgcatgatcttcagcaaccgccacctcggccagacc
ctgggctacgaccgtaccgagctggcgcatatgggcgagcgcttctgggagctgctgctg
caccccgaggatgccacgcactaccaggcgctgcgccagcaacagcgggacagcggccat
gaccagccgctgcactgccagctgcgtttccgccaccgcgatggcggctggcgctgctac
gacatccgcgaacaagtgctgacccgtgacgccgacggcctggtgacacgcatcatcggc
gtgggtaaggacgtgacggtgcagatcgaggccagccagtcgctgcgtgacagcgagcag
cgctaccgcatgctcgccgaaagcatcagcgacgtgatcttctccaccgacaacctgctc
cagctcaactacgtaagcccctcggtgcaaagcgtgctgggctaccaggccgactggatc
ttcgccaacggctggcagtcgatcatcgccaacccgtcccagctcaccggcatctacagc
ctgatggagcgcgtcagcaaggccatgggcgacccggcccagctggcccagctacgcaac
caactgcccacccagctgttccttttcgactgcctgcgcgccgatggccgcaagatcccc
atcgaactgcgcctggtgctggtgtgggacgacgaagagcgcttcgaaggcgtgctcggg
gttggccgcgacatcagccagcaacgccgtgccgagaaagacctgcgcatggccgcgacg
gtattcgagcactccacctcggccatcctcatcaccgacccggcgggctatatcgtccag
gccaacgaagcgttcagccgcgtcagtggctacgccgtcagcgaggtgctcgaccagttg
ccgggcatgcttaccgtcgacgagcagcaggaaggccacctgcgctacgtggtgaagcag
ctttatcagcgcggcagctgggagggcgaaatgtggctcaagcgccgcgacggcgaccac
tacccggcctgggtcggtattaccgcagtgctggacgacgaaggcgacctggccagctac
gtgtgtttcttcaccgacatcagcgagcgcaaggccagcgaacagcgcatccaccgcctg
gcctactacgacgccctcacccacctgcccaaccgcacgttgttccaggaccgtctgtac
aacgccctgcagcaggccgagcggcaaaaggcctgggtggtgctgatgttcctcgacctg
gaccgcttcaagccgatcaacgactccctcggccacgctgccggtgaccgcatgctcaag
gacatggcccagcgcctgctggcctgcgtggacaacgacgacaccgtggcgcgcatgggc
ggcgacgagttcaccctgctgctgcaaccgcgcgctacccgtgaaatggcactcaaccgc
gccatccacgtggccgagaacatcctcggcagcctggtgcggccgttcgtgctggaaaac
cgcgagttcttcgttaccgcaagtatcggcatcgccctcagcccgcaggacggcagcgag
ctgagccagctgatgaaaaacgccgacaccgccatgtaccacgccaaggagcgcggcaag
aacaacttccagttctaccaggcggagatgaacgccagcgccctggaacgcctggagctg
gagagcgacctgcgccatgccatggagcagaacgagttcatcctctactaccagccgcag
ttcagtggcgacggcaagcgcctgaccggcgcagaagccctgctgcgctggcgccacccg
acccgcggcctggtcccgccgggcgacttcatcccggtgatcgaagaactgggcctggtg
gtggacgtgggcgactgggtgctgcgcgaggccagccgccagctcaaggcctggcacaag
gccaaggtgcgcgtgcccaaggtgtcggtgaacatctcggcgcggcagttctccgacggc
cagctgggcacgcgcatcgccaccattctggaagaaaccggcctgccaccggcgtgcctg
gagctggagctgaccgaaagcatcctgatgcgcgaagtgaacgaagccatgcagattctc
gccagcctgaaaaacctcggcctgagcatcgcggtggacgacttcggcaccggttactcg
tcgctgaactacctcaagcagttcccgatcgatgtgttgaagatcgaccgcaccttcgtc
gacggcctgcctgaaggcgagcaggatgcgcagattgcccgagcgatcatcgccatggcc
cacagcctcaacctggcggtgatcgccgaaggggtggagacccacgagcagctggagttc
ctgcgcgagcatggttgcgacgaggtgcagggctacctgttcgggcggccgatgccggcg
catcagttcgaggcgcagttcgccaacgagaagctcttcatgttccattga
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