Pseudomonas plecoglossicida: RK21_04486
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Entry
RK21_04486 CDS
T03646
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RK21_04486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppj03400
]
RK21_04486
Enzymes [BR:
ppj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RK21_04486
DNA repair and recombination proteins [BR:
ppj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RK21_04486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
AJG15994
UniProt:
A0A099MUY3
LinkDB
All DBs
Position
4697346..4697588
Genome browser
AA seq
80 aa
AA seq
DB search
MARKKASLDFEQSLADLQALVERLENGELSLEESLAAFEQGIALTRDCQGALAQAEQKVQ
ILLERDGELAAQPFDAEPEA
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaaagcctccctcgatttcgagcaatccctcgcagacctgcaagcactg
gtcgagcgcctggagaacggcgagttgtcgctggaagagtcgctggccgccttcgagcaa
ggcatcgccctgacccgcgattgccagggtgccctggcccaggccgaacagaaggtgcag
atcctgctggaacgcgatggcgaactggcggcccagcccttcgacgcggagccggaagca
tga
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