Pseudomonas plecoglossicida: RK21_04524
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Entry
RK21_04524 CDS
T03646
Name
(GenBank) formate dehydrogenase subunit beta
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00630
Glyoxylate and dicarboxylate metabolism
ppj00680
Methane metabolism
ppj01100
Metabolic pathways
ppj01120
Microbial metabolism in diverse environments
ppj01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RK21_04524
09102 Energy metabolism
00680 Methane metabolism
RK21_04524
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Gene cluster
GFIT
Motif
Pfam:
Fer4_11
Form-deh_trans
Fer4_7
Fer4_2
Fer4_9
Fer4_10
Fer4_6
Fer4_21
Fer4
Fer4_4
Fer4_17
Fer4_15
Fer4_3
Fer4_22
Fer4_8
Fer4_16
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
AJG16032
UniProt:
A0A099MUV5
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All DBs
Position
complement(4730814..4731764)
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AA seq
316 aa
AA seq
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MASQDIIARSATTTVPPSVRQQQEVAKLIDTTKCIGCKACQVACSEWNELRDEVGHNHGT
YDNPQDLTAETWTLMRFTEHERDDGNLEWLIRKDGCMHCAEPGCLKACPSPGAIIKHANG
IVDFNQDHCIGCGYCITGCPFNIPRISQKDHKAYKCTLCSDRVTVGLEPACVKTCPTGAI
VFGTKDEMKVHAAERIVDLQSRGYDKAGLYDPDGVGGTHVMYVLHHADTPKLYAGLPDQP
VISPLVGLWKGITKPLALLAMGAAVLAGFFHYVRVGPQRVEEDEHPTPADESVHQVDPSV
HVYDPTKPGGQGEQRP
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggccagccaagacatcatcgcccgctcggccaccaccaccgtaccgccttcggtacgc
cagcagcaggaagtcgccaagctgatcgacaccaccaaatgcatcggctgcaaggcttgc
caggtggcgtgttcggagtggaacgaactgcgtgacgaggtcggccacaaccacggcacc
tacgacaacccccaggacctcactgccgagacctggaccctgatgcgctttaccgagcac
gagcgcgacgacggcaacctggagtggctgattcgcaaggatggctgcatgcactgcgcc
gagccaggttgcctgaaggcgtgcccgagccctggggcgatcatcaagcacgccaacggc
atcgtcgacttcaaccaggaccactgcatcggttgtgggtactgcatcaccggttgcccg
ttcaatatcccgcgtatttcgcagaaggaccacaaggcgtacaagtgcaccctgtgttcc
gaccgcgtgaccgtgggcctggagccggcctgcgtgaaaacctgcccgaccggggcgatc
gtgttcggcaccaaggatgagatgaaggtgcatgctgccgagcgcatcgtcgacctgcag
tcgcggggctacgacaaggctgggctttacgacccggacggcgtcggtggcacccacgtg
atgtatgtgctgcaccatgccgacacgccgaagctgtacgccggcctgccggaccagccg
gtgatcagtccgctggtggggctgtggaagggcattaccaagccgctggcgctgctggcc
atgggggctgcggtgctggccgggttcttccactatgtgcgggtagggccacagcgggtg
gaggaggacgaacacccgacacccgcggatgaaagcgtgcaccaggtggacccgtcggtc
catgtctatgatccgaccaagcccggtgggcaaggggagcagcgaccatga
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