Pseudomonas plecoglossicida: RK21_04701
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Entry
RK21_04701 CDS
T03646
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00260
Glycine, serine and threonine metabolism
ppj00460
Cyanoamino acid metabolism
ppj00630
Glyoxylate and dicarboxylate metabolism
ppj00670
One carbon pool by folate
ppj00680
Methane metabolism
ppj01100
Metabolic pathways
ppj01110
Biosynthesis of secondary metabolites
ppj01120
Microbial metabolism in diverse environments
ppj01200
Carbon metabolism
ppj01230
Biosynthesis of amino acids
ppj01240
Biosynthesis of cofactors
ppj04981
Folate transport and metabolism
Module
ppj_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RK21_04701
09102 Energy metabolism
00680 Methane metabolism
RK21_04701
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RK21_04701
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RK21_04701
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RK21_04701
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RK21_04701
Enzymes [BR:
ppj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RK21_04701
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AJG16209
UniProt:
A0A099N8V7
LinkDB
All DBs
Position
complement(4927555..4928808)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANAAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPEFKAYQQQVIENAQAMAQ
VFIDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVALAGWICDILDNLGDADVEADVAKNVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagattcagggttacgacgatgcactgctggcggcgatgaat
gccgaagagcagcgccaggaagaccacatcgagctgatcgcctcggaaaactacacctcc
aagcgcgtgatgcaggcccaaggcagcggcctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggctgcgagcacgtggacaaggtcgaggccctggccatcgag
cgcgccaagcagctgttcggtgccgactacgccaacgtccagccgcactccggctcctcg
gccaacgctgcggtttacctggccctgctgcaggctggtgacaccatcctcggcatgagc
ctggcccacggcggccacctgacccacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgctgtgcaatacggcatcgacactaacaccggcctgatcgactacgacgaagtcgag
cgcctggctgtcgagcacaagccaaaaatgatcgttgccggcttctcggcctactccaag
accctcgacttcccacgcttccgcgccatcgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgtagccggcctggttgccgctggcctgtacccgaacccgatcccgttc
gccgatgtggttaccaccaccactcacaagaccctgcgcggcccacgtggcggcctgatc
cttgccaagtcgaacgaagagatcgagaagaagctgaacgccgcggtgttcccaggcgcc
cagggcggcccgctgatgcacgtgatcgccgccaaggccgtttgcttcaaggaagcgctg
gagcctgaattcaaggcctaccagcaacaagtgatcgaaaacgcccaggccatggcccag
gtgttcatcgaccgcggctacgacgtggtttccggcggcaccgacaaccacctgttcctg
gtcagcctgatccgccagggcctcaccggcaaagatgccgacgccgccctgggccgcgcg
cacatcaccgtcaacaagaacgccgtgccgaatgacccgcagtcgccattcgtcacctcg
ggcctgcgcatcggtaccccggccgttaccacccgcggcttcaaggtcgctcagtgcgtg
gccctggccggctggatctgcgacatcctcgacaacctcggtgacgcagacgtcgaagcc
gatgtggcgaagaacgtcgcggccctgtgcgcagatttccctgtttaccgctga
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