Pseudomonas plecoglossicida: RK21_04721
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Entry
RK21_04721 CDS
T03646
Name
(GenBank) AraC family transcriptional regulator
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppj03000
]
RK21_04721
Transcription factors [BR:
ppj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RK21_04721
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AJG16229
LinkDB
All DBs
Position
complement(4950641..4951585)
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AA seq
314 aa
AA seq
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MPQIIHFLLLPGFSAMGFISALEPLRVANRFKGPLYRWQVLSLDGGAVLASNGMSVNADA
ALAAGEPGGILLIVAGFEPLACYGPALQQALRRLDHEGVVLGGIDTGAVVLAEAGLLDGH
RATVHWEALEAFKERYPRLQVTQELFEIDRRRITCAGGTASIDLMLDLIGQAHGSELAVQ
VSEQFVLGRIRQRQDHQRMQIASRYGISNKKLVKVIGEMERNIEQPLNTQVLADAVQVTR
RQLERLFRLHLDDTPSGFYLRLRLDKARQLLRQTDMSVLEVAVACGFESASYFTRSYRAR
FERCPREDRLARVV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaatcattcacttcctgttgttgcccgggttctcggccatgggtttcatcagt
gccctggaaccactgcgggtggccaaccgcttcaagggcccgttgtatcgctggcaggtg
ttgagcctggacggcggggcggtgctggccagcaatggcatgtcggtgaacgccgatgca
gcgctggcggcgggcgagcctggtggcatcctgctgatcgtcgccggtttcgagccattg
gcctgttatgggccggcgctgcagcaggcgctacgccgcctggaccatgagggggtggtt
ctgggtggcatcgataccggcgcggtggtgctggccgaggccggcctgctcgacggccac
cgcgccaccgtgcactgggaggcgctggaggcgttcaaggagcgctatccacgcttgcag
gtgacccaggagctgttcgagatcgatcggcgtcgcatcacctgcgcaggcggtaccgcg
tcaatcgacctgatgcttgacctgatcggccaggcccatggcagcgagctggcggtgcag
gtgtccgagcagttcgtgctcgggcgtattcgccagcgccaggaccaccagcgcatgcag
atcgccagccgttacggcatcagcaacaagaagctcgtaaaggtgatcggcgagatggag
cgaaatatcgagcagccgctcaatacccaggtgctggccgatgcagtgcaggtgacccgg
cggcaactggagcgcctgttccgcttgcatctggacgacacgcccagtggcttctatctg
cgattgcgactggacaaggctcggcagctattgcgccagaccgacatgagtgtgctggag
gtggcagtggcgtgcgggttcgagtcggcgtcgtatttcacacgcagctaccgggcacgg
ttcgagcggtgtccgcgggaggatcggttggcccgggtggtgtga
DBGET
integrated database retrieval system
