Pseudomonas plecoglossicida: RK21_04909
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Entry
RK21_04909 CDS
T03646
Name
(GenBank) GntR family transcriptional regulator
Organism
ppj
Pseudomonas plecoglossicida
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
RepL
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJG16417
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Position
5152093..5153583
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AA seq
496 aa
AA seq
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MLYFQRNCTGRHAIAAQEYAVTLYLNLAELLGARIEQGLYRPGQRLPSVRALSVEHGVSL
STVQQAYRMLEDSGMVSPRPKSGYFVNDHRHLPALPAVSRPAQRPVDISQWEQVLELVRS
TPRQGVIQLGRGMPDIDSPTLKPLLRSLAQLSRRQDMPGLYYDNIHGNMALREQVARLML
DSGCRLGPADLVITTGCHEALSCSIRAVCEPGDIVAVDSPSFHGAMQTLKGLGMKALEIP
TDPVTGISLEALELALEQWPIKLIQITPSCNNPLGYIMPEARKKALLSLAQRYDVAILED
DVYGDLAYTYPRPRTVKSFDDDGRVLLCSSFSKTLAPGLRVGWVAPGRYLERVLHMKYIS
TGSTASQPQLAIADFIAGGHYQPHVRRMRSQYQRGRDLMSDWVTRYFPAGTRVSRPQGGF
MLWVELPEHFDTLRLNRALLEQDVQVAVGSIFSASGKFRHCLRMNFAARPTPQIEAAVRR
VGETALRLLEEESAGA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctgtattttcagcgcaactgtaccggtcgccacgctattgcagcgcaggagtatgcc
gtgaccctttacctgaacctcgccgaactgctcggtgcccgtatcgaacagggcctctac
cgccccggccagcgcctgccgtcagtgcgcgccctgagtgtggagcacggggtcagcctg
agcaccgtgcagcaggcctaccgcatgctggaagacagcggcatggtctcgccccggccc
aagtccggctacttcgtcaacgaccaccgccacctgccggccctgcccgccgtcagccgc
ccggcccagcgcccggtggacatctcgcaatgggagcaggtgctcgagctggtgcgcagt
accccacgccagggcgtgattcaactcggtcgcggcatgcccgacatcgacagccccacc
ctcaagccactgctgcgcagccttgcccaactgagccggcggcaggacatgcccgggctg
tactacgacaacatccacggcaacatggccctgcgcgaacaggtggcccggctgatgctc
gactccggctgccgccttggcccggctgacctggtgattaccactggctgccatgaggcg
ctgtcctgcagcattcgagcggtatgcgagccgggcgatatcgtcgcggtcgactccccc
agcttccacggcgccatgcaaaccctcaagggcctgggcatgaaagccctggaaatcccc
acagacccggttaccggcatcagcctggaggcgctggagctggcattggagcagtggccg
atcaagctcatccagatcacccccagctgcaacaaccctctcggctacatcatgcccgag
gctcgcaagaaggcactgctgagcctggcccagcgctacgatgtggccatcctggaagat
gatgtatacggcgacctggcctacacctacccgcgcccacgcaccgtcaagtcgtttgac
gacgacggccgcgtgttgctctgcagctctttctcaaagaccctcgcccccggcctgcgg
gttggttgggtagcgcccggtcgttacctggagcgggtgctgcacatgaaatacatcagc
accggaagcacggccagccagccgcagttggccattgccgacttcatcgccggcgggcac
taccagccccacgtacggcgcatgcgcagccagtaccagcgtggccgcgacctgatgagc
gactgggtgacccgctacttcccggcgggcacccgggtcagtcgaccgcaaggtggcttc
atgctgtgggtggaattacccgaacatttcgatacgctgcgcctgaaccgggctttactg
gagcaggacgtgcaggttgccgtgggcagtattttctcggcctcgggcaagttccgccac
tgcctgcgcatgaacttcgccgcacggcccacgccgcagatcgaagctgccgtgcgcagg
gttggtgaaaccgcccttcgtctactggaagaagaaagcgccggcgcgtaa
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