Pseudomonas plecoglossicida: RK21_04918
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Entry
RK21_04918 CDS
T03646
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj02010
ABC transporters
ppj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RK21_04918
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RK21_04918
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_04918
Transporters [BR:
ppj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
RK21_04918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF3261
EF-G-binding_N
Motif
Other DBs
NCBI-ProteinID:
AJG16426
UniProt:
A0A0B5KL73
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All DBs
Position
5159425..5161029
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AA seq
534 aa
AA seq
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MRAAALSLLFNSLFAAGALIAASVAQAAPLSVCSEASPEGFDVVQYNSLTTTNATADVLM
NRLVEFDAAQGKVVPSLATSWTVSADGLIYDFTLRDVNFHTTAYFKPSRPLNADDVLFSF
QRMLYPAHAWHKTAPGGYPHAQSLQLGSLIKAIEAPAPNTVRFTLNHPDATFLATLSMGF
ASIYSAEYADKLLKAGTPEKLNRQPIGTGPFIFQRFQKDAVVRYRANPDYFAGKPAVDPL
IFAITTDANVRLQKLKRGECQVALSPKPLDIAEAGKDGNLKVATTPAFMTAFVAINSQHP
PLDKPEVRQAINLAFDKQAYLKAVFEDSAVAANGPYPPNTWSYAKDLPGYPLDLKKAKAL
LTKAGLAEGFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAEIRVIEWGELIRRAK
AGEHDLLFMGWAGDNGDPDNFLSPQFSCAAVKSGTNFARFCDSRLDQLISAGRTTNDQSV
RSRLYQQAQTLIQQQALWVPLAHPTAAALLRQGVEGYQVSPFGRLDFSKVSVNK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccgccgccctttccttattgttcaactccttgttcgccgcaggcgccctgatc
gccgccagcgttgcccaggccgccccgctgagcgtctgcagcgaggccagccccgaaggc
ttcgacgtggtgcagtacaactcactgaccaccaccaacgccacagccgatgtgctgatg
aaccgcctggtggagttcgacgcggcgcaaggcaaggtggtgccgagcctggcgaccagc
tggacggtatcggccgacggcctgatctacgacttcaccctgcgcgatgtgaacttccac
accaccgcctacttcaagccaagccgcccacttaacgccgacgatgtgctgttcagcttc
cagcgcatgctctaccccgcccatgcctggcacaagaccgcgccgggcggctacccgcat
gcccagtcgctgcaactagggagcctgatcaaggcgatcgaggcacccgcgccaaacacc
gtgcgcttcaccctcaaccacccggacgccacgttcctggccacgttgagcatgggcttc
gcatcgatctactccgcagagtacgcggacaaacttctcaaggccggcacgccggagaag
ctcaacagacagccgatcggcaccgggccgttcatcttccagcgcttccagaaggacgcc
gtagtacgctatcgcgccaaccctgactacttcgccggcaagccggcggtcgacccgctg
atcttcgccatcaccaccgatgccaacgtgcgcctgcagaagctcaagcgcggcgagtgc
caggtcgcgttgtcgcccaagccgctggacattgccgaagctggcaaggacggcaacctc
aaggtggccaccaccccggcgttcatgaccgccttcgtcgccatcaacagccagcacccg
ccgctggacaagccggaggtgcgccaggccatcaacctggccttcgacaagcaggcctac
ctcaaggccgtgttcgaagactccgcggtggccgccaacggcccctacccgcccaatacc
tggagctacgccaaggacctgcccggctacccgctggacctgaagaaagccaaggccctg
ctgaccaaggccggcctggccgagggcttcagcaccacgatctggacccgcccgtcgggc
agcctgctcaatcccaaccccagcctcggtgcgcagatgctgcaggccgacctggccaag
atcggcatcaaggccgagatccgcgtgatcgagtggggcgagctgatccgtcgcgccaag
gcgggcgagcatgacctgctgttcatgggctgggcgggcgacaacggcgacccggacaac
ttcctcagcccgcagttttcctgcgccgcggtgaagtcggggaccaacttcgcacgcttc
tgcgacagccgcctggaccagttgatcagcgccgggcgcaccaccaacgaccagagtgtg
cgcagccggctttaccagcaggcgcaaaccttgattcagcaacaggcgctgtgggtgccg
ctggcgcacccgacggcggcggccctgctgcgccagggggtcgaggggtatcaggtgagc
ccgttcgggcggttggatttcagcaaggtgtctgtgaacaagtaa
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