Pseudomonas plecoglossicida: RK21_04988
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Entry
RK21_04988 CDS
T03646
Name
(GenBank) RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppj03000
]
RK21_04988
Transcription factors [BR:
ppj03000
]
Prokaryotic type
Helix-turn-helix
Other families
RK21_04988
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AJG16496
UniProt:
A0A099N648
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Position
complement(5226280..5227146)
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AA seq
288 aa
AA seq
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MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC
SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREHLDPQALQQ
AVTAMAQAQRVEFYGFGASGAVAADAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVAV
CISQSGRSKDLLITANLVRESGANLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSIKATDD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctgttgcaacatatcgcccaatcgcgccacctgctgcgcaaatcggaactcaag
gtagccgaccacgtgctactcgacccggctgccgtcatgcacagctccatggccgatctg
gcgcacagcgtgggtatcagcgaaccgaccatcgtgcgtttctgccgcgcgatcggttgc
tcgggcttccaggacctgaagctgaagctggcgcagagcctggctgcgggggcgagtttc
ggccagttcgccatccatgaagacgactcggtcgctgactacagcctgaagatcttcgac
accacgctgcacaccctgatggaagtgcgcgagcacctcgacccacaagcgctgcagcag
gcggtgactgccatggcccaggcgcagcgtgtggagttctatggctttggtgcttccggt
gcagtggcggccgatgctcagcacaaattcttccgtctgttgctcagcgcggcagcctat
tccgacccgcacatgcaggcgatgtcggcggtgaccctgaagccgggtgatgtggcggta
tgcatttcccagtcgggccgctccaaggacctgctgattaccgccaacctggtccgtgag
agcggcgccaacctgattaccctgtgcccaagccagacaccgctggcggagctatcgacg
gtaaacctggcgatcgatgtgcatgaggacaccgaaatctacaccccgctgacctctcgt
atcgcccacctggtggtgatcgacgtgctggccatgggcgtagccatggcgcgcgggccg
agcctggtcaaccacctgaagagcgtgaagcgcagcttgcgcagcctgcgcttgtcgccc
aagtcgatcaaggctaccgacgactga
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