Pseudomonas plecoglossicida: RK21_05156
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Entry
RK21_05156 CDS
T03646
Name
(GenBank) tRNA threonylcarbamoyladenosine biosynthesis protein RimN
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppj03009
]
RK21_05156
03016 Transfer RNA biogenesis [BR:
ppj03016
]
RK21_05156
Enzymes [BR:
ppj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
RK21_05156
Ribosome biogenesis [BR:
ppj03009
]
Prokaryotic type
Other maturation factors
RK21_05156
Transfer RNA biogenesis [BR:
ppj03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RK21_05156
Prokaryotic type
RK21_05156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Amanitin
Motif
Other DBs
NCBI-ProteinID:
AJG16664
LinkDB
All DBs
Position
5409100..5409657
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AA seq
185 aa
AA seq
DB search
MVSSFRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEDAVYRLLALKSRPVDKGLILVAD
NIRQFDFLFEDFPEDWIDRMGSTWPGPNTWLVPHQDLLPEWVTGEHDTVALRVSDHPVVR
ELCALVGPLISTSCNPGGRPAAKTRLRVEQYFHGQLDLVLGGALGGRKNPSVIRNLATGE
VVRPG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcagttttcgtgtgcaacaagccgcacgtgagatccgggcgggtgcagtgatc
gcctacccgacggaagcggtctggggcctgggctgcgacccgtggaacgaggacgcggtg
tatcgcctgctggcgctgaagtcgcggcctgtggataaaggcctgatcctggtagccgac
aacatccgccagttcgacttcttgttcgaggacttccccgaagactggatcgaccgcatg
ggcagcacctggccggggccgaacacctggttggtgccgcaccaggacctgttgcccgag
tgggtgaccggtgagcatgacacggtggcgctgcgggtcagcgaccatccggtggtgcgt
gagttgtgtgcgttggtggggccgttgatttccacttcgtgcaacccgggcgggcgcccg
gcggcgaagacccggttgcgggtggagcagtacttccatggtcagctggatctggtgctg
gggggggcgttgggtggaaggaagaaccctagtgtgattcgcaacctggccactggcgaa
gtcgttcgcccgggctga
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