KEGG   Pseudomonas plecoglossicida: RK21_05221
Entry
RK21_05221        CDS       T03646                                 
Name
(GenBank) two component sigma-54 specific Fis family transcriptional regulator
  KO
K11384  two-component system, NtrC family, response regulator AlgB
Organism
ppj  Pseudomonas plecoglossicida
Pathway
ppj02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RK21_05221
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ppj02022]
    RK21_05221
Two-component system [BR:ppj02022]
 NtrC family
  KinB-AlgB (alginate production)
   RK21_05221
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 VpsR AAA cREC_REC Mg_chelatase AAA_22 HTH_23 AAA_2 AAA_19 AAA_16 HTH_29 Xre-like-HTH nSTAND3 MCM HTH_50 IstB_IS21
Other DBs
NCBI-ProteinID: AJG16729
UniProt: A0A099N8E5
LinkDB
Position
complement(5471042..5472388)
AA seq 448 aa
MESAQDNQGRILLVDDESAILRTFRYCLEDEGYNVATANSAAQAEALLQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEVRKPKDGLDSHSPAMMAVLETARQVATTDANILILGESGTG
KGELARAIHGWSKRARKSCVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRF
REDLLYRLNVITLHLPPLRERSEDILTLADRFLARFVKEYSRPARGFSDEARTALLNYRW
PGNIRELRNVVERASIICPQERVEISHLGMGEQPAGNAPRIGAALSLDELERAHIGAVLA
ASDTLDQAAKTLGIDASTLYRKRKQYNL
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggagtcagcccaggacaaccaaggccgcattctgctggtggatgacgagtccgcgatc
ctgcgcaccttccgctactgcctggaggacgagggctacaatgtggcaacggccaacagc
gccgcccaggccgaggccttgctgcagcgccaagtattcgacctgtgcttcctcgatttg
cgcctgggcgaggacaacggcctcgatgtgctggcgcagatgcgtatccaggccccctgg
atgcgggtggtgatcgtaaccgcgcactcagcgatcgatacggcggtagacgcgatccag
gccggcgccgccgattacctggtcaagccgtgcagccccgaccaactgcgcctggctacc
gccaaacagttggaagtgcgccagctttccgcgcgactggaggccctggaaggtgaagtg
cgcaaacccaaggacggcctcgactcgcacagcccggccatgatggcggtactggaaacc
gcccgccaggtcgctaccaccgacgccaacatcctcatccttggcgagtcgggcacaggt
aaaggtgaactggcccgggccattcacggctggagcaagcgcgcgcgcaaatcctgcgta
accatcaactgcccgtcactgaacgccgagctgatggaaagcgagttgttcggccacacc
cgcggcgccttcaccggcgccagcgaaagcaccctggggcgagtcaaccaggcagatggg
ggcacgctgttcctcgacgagatcggcgatttcccgctgaccttgcagcccaaactgctg
cgcttcatccaggacaaggaatacgagcgcgtcggcgacccggtaacccgtcgcgccgat
gtgcgtatactcgccgctaccaacctcaacctcgaagagatggtgcgtgagagccgtttc
cgcgaagacctgctgtatcgcctgaacgtcatcactttgcacctgccgccgctgcgcgag
cgcagtgaagacatcctgaccttggccgaccgctttctcgcccgcttcgtcaaggaatac
tctcggcctgcgcgcggcttcagtgacgaagcccgcacagccctgctcaactaccgctgg
cccggcaacattcgcgaactgcgtaacgtggtggagcgggccagtatcatctgcccgcag
gaacgcgtggaaatcagccacctgggcatgggcgagcagcctgctggtaacgcccctcgc
ataggcgctgcactgagccttgatgagctggagcgcgcccacattggtgcggtgctggcc
gccagtgacacccttgaccaggccgccaagaccctggggatcgatgcatccaccctgtac
cgcaagcgcaagcagtacaacctatga

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