Pseudomonas plecoglossicida: RK21_05365
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Entry
RK21_05365 CDS
T03646
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RK21_05365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppj03019
]
RK21_05365
Messenger RNA biogenesis [BR:
ppj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RK21_05365
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
AJG16873
UniProt:
A0A099N5R4
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All DBs
Position
5643460..5643939
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AA seq
159 aa
AA seq
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MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
ERDDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLVSNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacccggatggttttcgccccaatgtcgggatcattctcacgaatgatgccggg
caggtgctatgggctcgacggatcaaccaggatgcctggcagtttccccagggtggcatc
aaccctgacgagacgccggaagatgccctgtaccgcgagctgaacgaagaagttggcctt
gaacgcgatgatgtggaaattcttgcctgcacccgtggctggttgcgttatcgtttaccc
cagcgactggtgcgtacgcatagccagccgctgtgcatcggccagaagcagaaatggttc
ctgctgcgtctggtcagcaacgaacaacgggtgcggatggacctgaccggcaagccggaa
ttcgacggctggcgttgggtcagctattggtacccgctgggccaggttgtgacattcaag
cgcgaggtctaccgacgcgccctgaaagagctagcaccgcgtctgctgacgcgcgactga
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