KEGG   Pseudomonas plecoglossicida: RK21_05365
Entry
RK21_05365        CDS       T03646                                 
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ppj  Pseudomonas plecoglossicida
Pathway
ppj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RK21_05365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppj03019]
    RK21_05365
Messenger RNA biogenesis [BR:ppj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     RK21_05365
SSDB
Motif
Pfam: NUDIX NUDIX_4 Nudt16-like NUDIX_2
Other DBs
NCBI-ProteinID: AJG16873
UniProt: A0A099N5R4
LinkDB
Position
5643460..5643939
AA seq 159 aa
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
ERDDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLVSNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRD
NT seq 480 nt   +upstreamnt  +downstreamnt
gtgatcgacccggatggttttcgccccaatgtcgggatcattctcacgaatgatgccggg
caggtgctatgggctcgacggatcaaccaggatgcctggcagtttccccagggtggcatc
aaccctgacgagacgccggaagatgccctgtaccgcgagctgaacgaagaagttggcctt
gaacgcgatgatgtggaaattcttgcctgcacccgtggctggttgcgttatcgtttaccc
cagcgactggtgcgtacgcatagccagccgctgtgcatcggccagaagcagaaatggttc
ctgctgcgtctggtcagcaacgaacaacgggtgcggatggacctgaccggcaagccggaa
ttcgacggctggcgttgggtcagctattggtacccgctgggccaggttgtgacattcaag
cgcgaggtctaccgacgcgccctgaaagagctagcaccgcgtctgctgacgcgcgactga

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