Pseudomonas plecoglossicida: RK21_05455
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Entry
RK21_05455 CDS
T03646
Name
(GenBank) transcriptional regulator BetI
KO
K02167
TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppj03000
]
RK21_05455
Transcription factors [BR:
ppj03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RK21_05455
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_6
TetR_N
TetR_C_31
LacI
Motif
Other DBs
NCBI-ProteinID:
AJG16963
UniProt:
A0A099N5K4
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All DBs
Position
complement(5743898..5744554)
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AA seq
218 aa
AA seq
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MPKVGMQPIRRQQLIEATLQAVDQVGLGDASIALIARLAGVSNGIISHYFRDKNGLIAAT
MGYIMNMLNEGVRARRQALTDDSPRAHLKVIIEGNFDASQVNGPAMKTWLAFWASSMHQP
DLHRLQRINDHRLYSNLCCQFRRALPLYHARKAARGLAALIDGLWLRGALSGDAFDTDQA
IRIAYEYMDLQLAKQHTLGTNDQAAEQPRTALANPAGA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggtcggtatgcaacccatccgccgccagcagttgatcgaagccacgttgcag
gcggtcgatcaggtcggactgggtgacgccagcattgcgctgattgcccgtttggccggt
gtgtcgaacggcatcatcagtcactactttcgggacaagaacggcctgatagcagcgacg
atgggttacatcatgaacatgctcaacgaaggtgtcagagcacgtcgccaggccctgacg
gacgacagcccgcgcgcccacctgaaagtgatcatcgagggcaacttcgatgccagccag
gtaaacggcccggcgatgaaaacctggttggccttctgggcttccagcatgcaccagccc
gatttgcacaggttgcagcggatcaacgaccaccgcttgtattccaacctgtgctgccag
ttccgccgcgccctgccgctctaccatgcgcgcaaggcagcccgcggcctggcagctttg
atcgacggcttgtggctgcgtggcgccctgtcgggtgatgcattcgacaccgaccaggcg
atacggattgcttacgaatacatggatctacaactggctaaacagcacaccctgggtaca
aacgaccaggccgctgaacaaccgcgcacggcccttgccaacccagcaggagcgtga
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