Pseudomonas plecoglossicida: RK21_05471
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Entry
RK21_05471 CDS
T03646
Name
(GenBank) thiamine biosynthesis protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00730
Thiamine metabolism
ppj01100
Metabolic pathways
ppj01240
Biosynthesis of cofactors
ppj04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RK21_05471
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
RK21_05471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppj03016
]
RK21_05471
Enzymes [BR:
ppj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
RK21_05471
Transfer RNA biogenesis [BR:
ppj03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RK21_05471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
ThiI_fer
Rhodanese
QueC
tRNA_Me_trans
DUF2110_N
Motif
Other DBs
NCBI-ProteinID:
AJG16979
UniProt:
A0A099N722
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All DBs
Position
5764996..5766450
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AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRKRFIRQLGKNIRNVLKDLDPELVVDGVWDNLEVVTRVEDEK
VQREMIERLTCTPGITHFLQVEEYPLGDFDDIVAKCKQHFGHLLAGKHFAVRCKRGGHHD
FTSMDVDRYVGSQLRQQCGAAGIELKNPEVLVRIEIRDQRLYVIHNQHQGIGGYPLGALE
QTLVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELGVMEVAHYLWKKFGSSQRVL
FISVPFEEVVGEILNKVDNSYMGVTLKRMMLRGAAHMADRLEIDALVTGEAISQVSSQTL
PNLSIIDSATDKLVLRPLLASHKQDIIDQAYAIGTADFAKHMPEYCGVISVNPTTHAKRH
RMEHEEKQFDMAVLERALERARLISIDHVIDELGKDIEIEEVTEALPGQIVIDIRHPDAQ
EDEPLVLDGIEVQAMPFYAINSKFKQLDANRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttatcgtcaaagtcttcccagaaatcaccatcaagagccggccggtgcgcaag
cgcttcatccgccagctcggcaagaacatccgcaacgtgctcaaggacctcgatcctgag
ctcgtggtcgatggtgtctgggacaatctcgaagtggtcacccgcgtcgaagacgaaaag
gtccagcgcgagatgatcgagcgcctcacctgcaccccgggtatcacccacttcctgcag
gtagaggaatacccgctcggcgacttcgatgacatcgtcgccaagtgcaagcagcacttc
ggccacctgctggccggcaagcacttcgccgtgcgctgcaagcgcggtggtcaccacgac
ttcacctcgatggacgtcgaccgttacgtcggcagccagctgcgccagcagtgcggcgcc
gccggcatcgagctgaagaacccggaagtcctggtgcgcatcgaaatccgcgaccagcgc
ctgtacgtgatccataaccagcaccagggcatcggcggctacccgctgggcgccctggag
cagacactggtactgatgtccggtggcttcgactccaccgtggcggcttatcagatgatg
cgccgcggcctgatgacccacttctgcttcttcaacctcggtggccgtgcccacgagctg
ggcgtgatggaagtggctcactacctgtggaagaagttcggcagcagccagcgcgtgctg
ttcatcagcgtgccgttcgaggaagtggtcggcgagattctgaacaaggtcgacaacagc
tacatgggtgtgacgctgaagcgcatgatgctgcgtggtgccgcgcacatggccgaccgc
ctggagatcgatgccctggtcaccggcgaagcgatttcccaggtgtccagccagaccttg
ccgaacctgtcgatcatcgactcggccaccgacaagctggtgctgcgccccctgctggcc
agccacaagcaggacatcatcgaccaggcctacgcgatcggcactgccgacttcgccaag
cacatgccagaatactgcggcgtgatctcggtaaacccgaccacccacgccaagcgccac
cgcatggagcatgaagagaagcagttcgacatggccgtgctggagcgcgccctggaacgc
gcccggttgatctccatcgaccatgtgatcgacgaactgggcaaggacatcgaaatcgag
gaagtgaccgaggcgctgcccggccagatcgtcatcgacattcgtcaccccgatgcccag
gaagacgaacctctggtgctggacggtatcgaagtccaggccatgccgttctatgccatc
aacagcaagttcaagcagctggatgccaaccgccagtacttgctgtattgcgacaaaggt
gtgatgagccgtctgcacgcacaccacctgctcagtgagggacatgccaatgtgcgtgtt
tatcgtccggcataa
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