Pseudomonas plecoglossicida: RK21_05635
Help
Entry
RK21_05635 CDS
T03646
Name
(GenBank) DNA mismatch repair protein
KO
K03572
DNA mismatch repair protein MutL
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RK21_05635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppj03400
]
RK21_05635
DNA repair and recombination proteins [BR:
ppj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
RK21_05635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AJG17143
LinkDB
All DBs
Position
5951603..5953498
Genome browser
AA seq
631 aa
AA seq
DB search
MSGGSRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLRV
RDDGSGISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTAS
ATEAWQVETEGRDMTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIR
RLALARFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNGLRL
WGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLELEPN
GVDVNVHPTKHEVRFREGRSVHDFLYGTLHRALADVRPEDQLAAPAAVPEVVRATGQQAG
EFGPQGEMRLASPVLEQPRGPQQSFSSGGSGAGYQYQYTPRPSQPLPAAEAQAVYREFYK
PLDDGAVPTTLPESQGDIPPLGYALAQLKGIYILAENAIGLVLVDMHAAHERIMYERLKV
AMASEGLSGQPLLVPETLALSQREADCAEEHAQWFQRLGFELQRLGPETLAIRQIPALLK
QAEANRLVQDVLADLMEYGTSDRIQAHLNELLGTMACHGAVRANRRLAIPEMNALLRDME
NTERSGQCNHGRPTWTQMGLDDLDKLFLRGR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcggttcgcgcatccagctgctcagcccgcggctggccaaccagattgccgcc
ggcgaggttgtcgagcggccggcctctgtcgccaaagagttgctggagaacagcctggac
tccggcgcccggcgtatcgacgtggaagttgagcagggcggcgtcaagctgctgcgagtg
cgagacgatggcagcggcatctccgccgacgacctgccgctggccctggcccgtcacgcc
accagcaagatccgtgagttggaggacctggaaggggtcttgagcctgggctttcgtggt
gaggccctggcctcgatcagctcggtggcgcgcctgaccctgacctcgcgtaccgccagc
gctaccgaggcctggcaggtggaaaccgaaggccgggacatgacaccgcgggtgcagccg
gcggcgcatccggtgggtacttcggtggaagtgcgcgacctgttcttcaataccccggcc
cggcgcaagttcctcaaggccgagaaaaccgaattcgatcacctgcaggaagtgatacgg
cgcctggcgctggcgcgcttcgatgtcggcttccacctgcgccacaacggcaagagcatc
ctcagcctgcatgaggcccacgatgaaaccgcccgtgcgcggcgggtgggcgccatctgc
ggcccgggcttcatggagcaggcgctgccgatcgacgtggaacgcaacggcctgcgcctt
tggggctgggtcggcctgccgacgttctcgcgcagccaggcagacctgcagtatttcttc
gtcaacggccgtgcggtgcgcgacaagctggtcgcccacgccgtgcgccaggcctaccgc
gacgtgctgttcaatggtcggcacccgacttttgtgctgttcctggagttggagcccaac
ggcgtcgacgtcaacgtgcacccgaccaagcacgaagtgcgtttccgcgaggggcgctcg
gttcacgacttcttgtatggcaccctgcatcgcgccctggccgatgtgcgccctgaagac
cagttggcggcgccagctgccgtacccgaagtggtccgcgccacgggccagcaggccggt
gagttcggcccccagggcgaaatgcgcctggcctcgccggtgctcgagcagccgcgtggc
ccgcagcagtcattctccagcggtggtagtggtgcgggttaccagtatcagtacacgccg
cgcccctcgcagccgctgccggccgccgaggcacaggcggtgtatcgcgagttctacaaa
ccgctggatgacggcgcggtgccgacgacgctgcctgaaagccagggcgatattccaccg
ctgggctacgcgttggcgcagctcaagggtatctacatcctggccgagaatgccattggc
ctggtgctggtagacatgcacgccgctcacgagcgcatcatgtacgagcgcctcaaggtg
gccatggccagcgaaggcctcagcggccagccgctgctggtgcccgagaccctggccctg
agccagcgtgaagcagactgcgccgaagagcacgcgcagtggttccaacggctgggtttc
gaactgcagcgtctgggccccgagaccttggctatccgccagatcccggctttgctcaag
caggctgaggccaaccgcctggtgcaggatgtactcgccgacctgatggaatacggcacc
agcgaccgtatccaggcgcacctcaacgagctgctcggtaccatggcctgtcacggtgcc
gtgcgcgccaaccggcgcctggcgatccccgagatgaacgccctgctgcgtgacatggaa
aacaccgagcgcagcggccagtgcaaccatggtcgccccacctggacccagatgggcctg
gacgacctggacaaactcttcctgcgcggtcgatga
DBGET
integrated database retrieval system
