Pseudomonas plecoglossicida: RK21_05734
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Entry
RK21_05734 CDS
T03646
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00550
Peptidoglycan biosynthesis
ppj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RK21_05734
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppj01002
]
RK21_05734
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
RK21_05734
Enzymes [BR:
ppj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RK21_05734
Peptidases and inhibitors [BR:
ppj01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RK21_05734
Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RK21_05734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AJG17242
UniProt:
A0ABX4TZ35
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All DBs
Position
6053417..6054577
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AA seq
386 aa
AA seq
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MNITNLAKRLCLPVLLMITPAAFAAEQMTPAPPQLAAKSYVLMDASSGNVLVENNGDERL
PPASLTKLMTAYIATLDIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGI
IIQSGNDASVALAEHIAGSEDAFADMMNKTAADLGMANSHFMNPTGLPHPDHYSSAHDMA
TLARAIINVDPAHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVAS
AVRDGQRLIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELTKSPVWKGATGE
VKAGLANDLTLTMPKGQLKRLQASMTMNPQLTAPIAKGDVIGKVEVKLDEKVVHSADLIA
LDGVEEGGFFRRMWDSIRLFFYGLFN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaccaaccttgccaaacgactttgcctgcccgtactgctgatgatcacgcct
gccgccttcgcggctgagcagatgacgccggcgccaccgcaactggcagccaagtcctac
gtactcatggatgcgtccagcggcaacgtgctggtcgagaacaacggtgacgagcgcctg
ccgcctgccagcctgaccaagctgatgacggcctacatcgccaccctggacatccgtcgc
ggccagatcggtgaaaacgacccggttaccgtcagcgaaaacgcctggcggaccggcggt
tcgcgcatgttcatcaaggtgggcagccaggtgaccgtcagcgacctgctgcacggcatc
atcatccagtccggcaacgacgcctcggtcgccctggccgagcacatcgccggcagcgaa
gacgccttcgccgacatgatgaacaagaccgctgccgacctgggaatggccaacagccac
ttcatgaacccgaccggcctgccgcacccggaccattactcgtcggcccacgacatggct
accctggcccgtgcgatcatcaacgtcgacccggcccactacgccatctactcgcagaaa
gagttcttctggaacaacatcaagcagccaaaccgcaacctgctgctgtggcgtgacaag
actgtcgacggcctgaagaccggccacacagacgaagccggctactgcatggtggcttcg
gccgttcgcgatggccagcgcctgatcgccgtggtcttcggcaccaacagcgagcagtcg
cgtgctgccgagacccagaagctgctgacctatggcttccgcttcttcgaaacccagacc
ttctaccagaagggtaccgagctgaccaagtcgccggtctggaagggcgcgactggcgaa
gtgaaagctggcctggccaacgaccttaccctgactatgcctaaaggccaattgaagcgc
ctgcaggcttcgatgaccatgaacccgcagctcaccgcgccaatcgccaaaggtgacgtg
atcggcaaagtggaagtcaaactggacgagaaagtggttcacagcgccgacctgatcgcc
ctcgatggcgtcgaggaaggtggtttcttccgccgtatgtgggatagcatccgtctattc
ttctacgggttgttcaactga
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