Pseudomonas plecoglossicida: RK21_05794
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Entry
RK21_05794 CDS
T03646
Name
(GenBank) carbon storage regulator CsrA
KO
K03563
carbon storage regulator
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj02020
Two-component system
ppj02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RK21_05794
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
RK21_05794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppj03019
]
RK21_05794
Messenger RNA biogenesis [BR:
ppj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RK21_05794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CsrA
Motif
Other DBs
NCBI-ProteinID:
AJG17302
UniProt:
A0A0B5KSL2
LinkDB
All DBs
Position
complement(6112868..6113257)
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AA seq
129 aa
AA seq
DB search
MLILTRRVGETIRINNDIAVTILGVKGMQTRLGVDAPEGVPVHRQEIFERICAEGGKLPS
TDAQVDLQAKLLDREAQLGEADVLLREAIAYINDDLVNVDYRDTLLARIDKLLDRDQAEQ
TEKPREQQP
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgttgattttgacccgtcgcgtaggcgaaaccatccgcatcaacaacgacatcgctgtc
accatcctgggcgttaagggcatgcaaacgcgccttggagtagatgctccggaaggtgtg
ccggtgcatcgccaagagatcttcgagcgcatctgcgccgagggcggcaagctcccctct
accgacgctcaggtcgacctgcaggccaagcttctagatcgcgaggcccagctgggtgag
gctgatgtgttgctaagggaggcgatcgcctacatcaacgacgacctggtcaacgtcgat
taccgtgacacactgcttgcccgcatcgacaagctccttgatcgcgaccaggcagagcaa
acggaaaagcctcgggagcagcagccatga
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