Pseudomonas plecoglossicida: RK21_05869
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Entry
RK21_05869 CDS
T03646
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppj03016
]
RK21_05869
Enzymes [BR:
ppj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RK21_05869
Transfer RNA biogenesis [BR:
ppj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RK21_05869
Prokaryotic type
RK21_05869
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AJG17377
UniProt:
A0A099N473
LinkDB
All DBs
Position
6185481..6186398
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTNTGDAEGEVLQTREVTVGRADIEALLPRFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIGRLELLECEGTRARLSVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEELEQAHAEGGNEALDRFLMPSDS
GLQDWPLVCLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaacgtcagcggcatcatcctgctcgacaagccg
ctgggcttcacctccaacgccgccctgcaaaaggtgcgctggctgctcaatgcggaaaag
gccggtcacaccggcagcctcgatccgctggcaaccggcgtgctgccgctgtgctttggc
gaagcgaccaagttttcgcagtacctgctcgattccgacaagggctacgaaacggtcatg
cagatggggcagactaccaacaccggcgatgccgaaggtgaagtgctgcagacccgtgag
gtgaccgttggtcgcgccgacatcgaggccctgctgccgcgttttcgtggccagatcagc
cagataccgccgatgtactcggcgctcaagcgtgatggccagccgctttacaagctggca
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattggccgcttggagttg
ctcgagtgcgaaggcacccgtgcaaggctgagcgtaggatgcagcaaaggcacctatatc
cgcaccctggtggaggatatcggtgaggcccttggctgtggcgcctatgtcgccgagctg
cgcaggacccaggccgggcctttcgcgctggcacagacggtcaccctcgaggaactcgaa
caggcccacgccgaaggtggcaacgaagcgctcgaccgcttcctgatgccttcggacagc
ggcctgcaggactggccactggtgtgcctgtccgagcacagtgcgttttactggctgcat
gggcaggcggtacgcgcgccggacgcgccgcaatttggcatggtccgggtacaggatcac
aatgcgcgcttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccgcgtcgg
ctgattcggtcggaatga
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