Pseudomonas plecoglossicida: RK21_05883
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Entry
RK21_05883 CDS
T03646
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RK21_05883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppj03019
]
RK21_05883
Enzymes [BR:
ppj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RK21_05883
Messenger RNA biogenesis [BR:
ppj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RK21_05883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
BenE
Motif
Other DBs
NCBI-ProteinID:
AJG17391
LinkDB
All DBs
Position
complement(6201087..6202475)
Genome browser
AA seq
462 aa
AA seq
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MLKKLFQSFRPPVPGPHHRRTTPEVINKSQHSLQRHQFSRHAVNIVERLQSAGYQAYLVG
GCVRDLMLGITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHVHFGREIIEVATFRAH
HSEDDQGDSHRSSHNASGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVH
DIRNRLLRLIGDPTHRYQEDPVRMLRAVRFAAKLDFGIEKHTVQPIRELAPLLREIPPAR
LFEESLKLFLSGQGAIVFEMLVDLQLFEPLFPASSHALDERPTYTHTLISQALNNTDLRV
KQGKPVTPAFLFAALLWPALPARVLHLQNQGVPPIPAMNGAAHDLIAEQCARIAIPKRFT
LPIREIWDMQERLPRRSGKRADMLLDNPRFRAGYDFLLLRESAGEETDDLGQWWTDYQDA
NDSERREMIRELGSRDEGTGAGPRKRKRSGGKRKRSGDEAFE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtcgttccgcccgcccgtaccgggcccgcaccacaggcgc
accacgcctgaggtgatcaacaaaagccagcactcgctgcaacgccaccaattcagccgc
catgcggtgaacatcgtggaacgcctgcagagcgccggttaccaggcttacctggtcggt
ggctgtgtccgcgacctgatgctgggcatcacgccgaaagacttcgacgtcgccaccagt
gccacccctgaacaggtccgtgccgagttccgcaacgcacgcatcattggccgccgcttc
aagctggtccacgtgcatttcggacgtgaaatcatcgaagtcgcaactttccgcgcccac
cattcggaagacgaccagggcgacagccaccgttcgtcgcacaatgccagtggccgcatt
ctgcgtgacaacgtgtacggcaccctggaagaggacgcgcaacgtcgcgacttcaccatc
aacgccctgtactacgacccggtcagcgagcgcatcctcgactacgccaacggcgtgcac
gatatccgcaaccgcttgctgcgcctgatcggcgaccctacccaccgctatcaggaagac
ccggtgcgcatgctgcgcgcggtgcgcttcgccgccaagctcgacttcggcatcgaaaaa
cacacggtccagccgattcgagagctggccccactgctgcgcgaaattccgccagcgcgc
ctgttcgaagagagcctcaagctgttcctctccggccagggcgccatcgtcttcgaaatg
ctggtcgaccttcagttgttcgagccgcttttcccggccagttcgcatgccctggacgag
cgcccgacctacacccacacgctgatcagccaagcgctgaacaacaccgacctgcgcgtg
aagcaaggcaaaccggtaaccccggccttcctcttcgccgcgctgctgtggccagccctg
ccggcccgcgtgctgcacctgcagaaccagggcgtgccgcctatcccggccatgaacggt
gcggcccacgacctgatcgccgaacaatgcgcacgtatcgccatccccaagcgcttcacc
ctgccgatccgcgagatctgggacatgcaggagcgcctgccacgccgcagcggcaagcgc
gccgacatgctgctggacaacccgcgcttccgcgccggctacgacttcctgctgctgcgc
gaaagcgccggggaagaaaccgacgacctcggccagtggtggaccgactaccaggatgcc
aacgacagcgagcgccgcgagatgatccgcgaactgggcagccgtgacgaaggcaccggc
gccggcccgcgcaaacgcaagcgcagcggtggcaagcgcaagcgcagtggcgacgaggcg
ttcgagtga
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