Pandoraea pnomenusa 3kgm: U875_02580
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Entry
U875_02580 CDS
T02936
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K16053
miniconductance mechanosensitive channel
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppk02000
]
U875_02580
Transporters [BR:
ppk02000
]
Other transporters
Pores ion channels [TC:
1
]
U875_02580
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Phage_holin_3_2
Motif
Other DBs
NCBI-ProteinID:
AHB04410
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Position
551035..552273
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AA seq
412 aa
AA seq
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MTWEGMLAWLDNAPWARLAVALTILLVVALLVQALAQYLIVRVVRLVVQRTANRWDDALL
AHRVFQRAAHILPYLVIQFGIAWVPDLPPKAVLLISNIALATTLLYATLTIAGALDAAQT
VYALSEHARTRSIKGYVQLGKIALYVVAAIAIVATVIDRSPWLLLSGLGAMSAVLLLVFK
DTIMSFVASVQLTSNDMLRVGDWIEMPQVGADGDVVDIALHTVKVQNWDKTITTIPTWRL
ISESFRNWRGMQQAGGRRIKRTLCIDAGSVGFLDDAEIARLSRLHLLEPYLIEKRRSIAD
ANAALGVAAGVPANTRRLTNIGTFRAYALAYLKAHPNIHEGMTCMVRSLEPSSTGIPVEL
YCFTNTTVWAEYERVQGDVFDHLLAILPEFGLRMYQNPAGADFARWQAQRAA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgggaaggaatgttggcgtggctcgacaacgcaccgtgggcacggctggcggtg
gcgttgacgatactgctcgtggtggcgttgctcgtgcaggccctggcacagtacctgatc
gtgcgcgtcgtgcgcctcgtggtgcagcgcacggccaatcgctgggacgatgcactgctc
gctcaccgagtattccagcgggcggcgcacatcctcccgtacctcgtgatccagttcggg
attgcgtgggtcccggatctgccgcccaaggctgttctgctgatcagcaacattgcgctg
gccaccacgctcctttacgcgacattgaccattgccggagccctcgatgccgcgcaaacg
gtctatgccctgtcggaacatgcgcgcacacgctcgatcaaggggtacgtgcagctaggc
aagatcgcgctgtacgtggtggcggcgatcgccatcgtggccacggtcatcgaccgctcg
ccgtggctgctgctctccggcctgggcgcgatgtcggcggtgctgctgctggtgttcaag
gacacgatcatgtcattcgtggcgagcgtgcagctgacgtcgaacgacatgctgcgcgtc
ggtgactggatcgagatgccgcaggtcggcgcggacggcgacgtggtcgacatcgcgttg
catacggtgaaggtgcagaactgggacaagacgatcaccacgattccgacgtggcgtctg
atttccgagagcttccggaactggcgcggaatgcaacaggcgggcggccgtcgcatcaag
cggacgctgtgcatcgacgccggcagcgtcggattcctcgacgacgcggagatcgcgcga
ctgtcccggctgcatctgctcgagccgtacctgatcgaaaagcgtcgctcgattgccgac
gcgaacgctgcgctgggcgtggctgccggcgtaccggcgaatacccgtcgcttgacgaac
atcggcacgttccgcgcttatgcgctggcgtatctgaaggcgcacccgaacatccacgag
ggcatgacctgcatggtgcgctcgctggagccgtcgtcgacgggtatccccgtcgaactg
tattgcttcacgaacacgactgtctgggcggagtacgaacgcgtgcagggcgatgtgttc
gatcacctgctcgcgatcctgcccgagttcggcctgcgcatgtaccagaacccggccggt
gccgatttcgcgcgctggcaggcgcagcgcgcggcgtga
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