Pandoraea pnomenusa 3kgm: U875_03665
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Entry
U875_03665 CDS
T02936
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U875_03665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppk02000
]
U875_03665
Transporters [BR:
ppk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
U875_03665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
GPR_Gpa2_C
Motif
Other DBs
NCBI-ProteinID:
AHB04601
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Position
780320..781213
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AA seq
297 aa
AA seq
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MSTVAPSAGVSMTPAPRFDGRGWLVAPALVCLVAMFVYPFAYGLFLSFQPMDGGGVFANY
LKFFSEPTLWPTVLITLKLAVPATLINVGASVPAAFALRKSTRASKFVTMLLVVPVTLGT
VLIADGMLTYYGPNGWFPQALHALGLYHDEVRLTHNYWGVLISLVISGFPFAFLLILSYV
TGIDPTLARAAGTLGAGPWQQFRLIYLPLLVPGLTMAACLSFVQAFSVFPSAVLLGVPAG
ATRVVSIAAYEAAFESYDYSLASCVAIVMGFVQLLIVAGMLGARRAFYSGPTTGGKG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgtggcaccctctgccggcgtctcgatgacgccggccccacgcttcgacggc
cgtggctggctggtcgcgcccgcgctcgtatgcctggtggcgatgttcgtgtacccgttc
gcctacggcctgttcctgtcgttccagccgatggacggcggtggcgtgtttgcgaactat
ctgaagtttttcagcgaaccgacgctgtggccgacggtgctcatcacgctcaagctcgcg
gtgcccgcgacgctgatcaacgtgggggcgtcggtgccggcggccttcgcgcttcgcaag
agcacgcgggcgtcgaagttcgtgacgatgttgctggtggtgccggtcacgctcggcacc
gtgctcatcgccgacggcatgctgacttactacgggcccaatggctggttcccgcaggcg
ttgcacgccctgggcttgtatcacgacgaggttcgtctcacgcacaactactggggcgtg
ctgatctcgctggtgatttcgggatttccgtttgcattcctgctgatcctgtcgtacgtg
acgggcatcgaccccacgcttgcgcgcgcggccggcacgctcggcgccggaccctggcag
cagttccgcctgatctatctgccgttgctcgtgccggggctgacgatggcggcatgcctg
tcgttcgtgcaggcgttttcggtgttcccgtcggccgtgctgctcggggtgcccgcaggc
gccacgcgcgtggtgtcgatcgcagcctacgaggcggcgttcgaaagttatgactattcg
ctcgcgtcgtgcgtggcaatcgtgatgggcttcgtgcagttgctgatcgtggcaggcatg
ctcggcgcgcgccgggcgttctacagcggtccgaccacgggaggcaagggatga
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