Pandoraea pnomenusa 3kgm: U875_05390
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Entry
U875_05390 CDS
T02936
Name
(GenBank) DNA-binding protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppk03000
]
U875_05390
Transcription factors [BR:
ppk03000
]
Prokaryotic type
Helix-turn-helix
GntR family
U875_05390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
HTH_36
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AHB04895
LinkDB
All DBs
Position
1151313..1152740
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AA seq
475 aa
AA seq
DB search
MDFQQLKPSRDHSGPVYLQLYRRYREAIASGMLGPGDRVPSVRSLASALNLARGTVETAY
QMLASEGYFVTRGAAGTVVSPRLANLPDPAIAGARVPSGADAWRAPQAASGDVAPFQLGL
PALDAFPRKVWARLAGRSVRALETAAMTVPDSAGYAPLRHAIAGYLGISRGIVCAPEQVF
VTPGYRGALDLVCRALLEPGDAGWYEDPGYLFARECLTRAGMALTPVPVDDEGLNVKTGQ
QRAPKARFAVVTPTHQSPTGVALSLPRRLELLAWAQDSRAWIIEDDYDSEFRYHGRPLPA
LKSLDQNDRVLYTGTFSKVLFPGLRLAYLVVPRSQIARFRDIVVHMPGPGAILLQGMVAD
FMEQGHFARHLRKMRSLYAQRRGYLVDALAQTFGERLLVQPQAGGIHVLAHLARGENDSA
LAAAARARGLAVQALSDWRARRGGKGGLLMGFANFASDAAALAAVTRLAAALPGD
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggactttcagcaactcaaaccgagtcgggatcacagcggtccggtctatctgcagctg
taccggcgctatcgggaggccatcgccagcggcatgctggggccgggcgaccgcgtgccg
tcggtgcgcagtctcgccagcgccctgaaccttgcacgcggtaccgtcgagacggcctac
cagatgctggcgagcgaggggtatttcgtgacgcgcggcgcggcggggacggtggtgtca
ccgcggctcgcgaacctgcccgatccggcgattgccggtgcgagggtgccgtccggggcc
gatgcctggcgggcgccgcaggcggcatccggcgacgtcgcaccgtttcaactcgggttg
cccgcgttggacgcgtttccgcgcaaggtatgggcgcgtctggccgggcgaagcgtgcgt
gcgctggagacggcggccatgaccgttcccgattccgccgggtacgcgccgctccggcat
gcgatcgccggatacctcggcatctcccggggcatcgtttgcgccccggagcaggttttc
gtgacgccagggtatcgcggcgcgctcgatctggtatgccgcgcactactcgagcccggg
gatgccgggtggtacgaggatccggggtacctgttcgcgcgtgagtgtctgacgcgcgca
ggtatggcgctgacgccggtgcctgtggacgacgaggggctgaacgtaaagacagggcag
cagcgtgcgccgaaggcgcgcttcgccgtggtgacgccaacgcaccagagtcccaccggg
gtggcgctgtcgttgccgcggcgactggaactgctggcgtgggcacaagactcgcgggcg
tggatcatcgaggacgactacgacagcgagttccgctaccacggtcgcccgctaccggcg
ctcaagagtctggatcagaacgatcgcgtgctttatacgggcaccttcagcaaggtgctg
ttcccgggcctgcgcctggcctatcttgtggtgccgcggtcgcagatcgccaggtttcgg
gatatcgtcgtccacatgccgggccccggcgcgattctgctgcagggcatggtcgccgat
ttcatggaacagggacactttgcccggcacttgcgcaagatgcgcagcctgtacgcgcaa
cgccggggctatctcgtcgacgcattggcgcaaacctttggcgagcgcctgctcgtgcaa
ccgcaggccggcgggattcatgtgctggcgcatctggcgcgaggcgagaacgacagcgca
ctggccgcggcggcacgcgcacgcgggctggcggtgcaggcgttgagcgactggcgggca
cggcggggcggcaagggcggcctgctgatgggtttcgccaattttgcatcggacgccgcg
gcgcttgccgcagtcacgcggctggccgccgcactgcccggcgactga
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