Pandoraea pnomenusa 3kgm: U875_06460
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Entry
U875_06460 CDS
T02936
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00250
Alanine, aspartate and glutamate metabolism
ppk00310
Lysine degradation
ppk00350
Tyrosine metabolism
ppk00650
Butanoate metabolism
ppk00760
Nicotinate and nicotinamide metabolism
ppk01100
Metabolic pathways
ppk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
U875_06460 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
U875_06460 (gabD)
00310 Lysine degradation
U875_06460 (gabD)
00350 Tyrosine metabolism
U875_06460 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
U875_06460 (gabD)
Enzymes [BR:
ppk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
U875_06460 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
U875_06460 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
U875_06460 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AHB05081
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Position
complement(1388981..1390429)
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AA seq
482 aa
AA seq
DB search
MQLKDPTLFKTLAWVDGQWIAADSGRTFDVIDPATGEVLAKVPELGAEETTRAVVAAEAA
QKAWAARTGKERATVLRRWFDLMMANTEDLAYLMTREQGKPLAEARGEIGYAASFIEWFA
EEAKRVDGDVLATPAADKRLVTLKQPVGVCAAITPWNFPAAMITRKVAPALAAGCAIVVK
PSELTPLSAFALAELAQRAGIPAGVFQVVTGDARAVGGVLTSHPTVRKLSFTGSTGVGRL
LMAQCAPTVKRLSLELGGNAPFIVFDDADLDAAVEGAIAAKYRNGGQTCVCANRFYIQDG
IYDAFAGKFAARVAEMKVGNGLEDGVVIGPLIEGKAVEKVVTLVEDAKSRGARVLVGGNA
HALGGTYYAPTVIADATSQMRVAREEIFGPVAPLFRFTRDVDAIALANDTEFGLAAYLYT
RDIARAWRTAEALEYGMVGLNTGLISNEVAPFGGIKQSGVGREGSHYGIEEYLELKYLCL
QV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaaagaccccactctgttcaagacccttgcctgggtcgacggccaatggatt
gccgccgacagcggcaggacgttcgacgtgatcgacccggccacgggcgaagtgctggcc
aaggtgccggagctcggcgcggaagaaaccacgcgggccgtggtggccgccgaagccgcc
cagaaggcttgggcggcacgcaccggcaaggaacgcgccaccgtgctgcgccgctggttc
gacctgatgatggcaaacaccgaggatctggcgtatctgatgacccgcgaacagggcaag
ccgcttgccgaagcgcggggagaaatcggctacgccgcgagcttcatcgagtggttcgcg
gaagaggccaagcgtgtcgacggcgatgtgctcgccacgcccgcggccgacaagcgtctg
gtaacgctcaagcaaccggtcggcgtatgcgcggccatcacgccgtggaatttcccggcg
gcgatgattacgcgcaaggtggcgccggcgctggccgccggctgcgccatcgtggtgaag
ccctcggagctcacaccgctgtcggcctttgccctggccgagctggcgcagcgcgccggt
attccggcgggcgttttccaggtcgtcacgggcgacgcgcgtgccgtgggcggtgtgctc
acctcgcaccccacggtgcgcaagctgtcattcaccggttccacgggcgtgggccgcctg
ctcatggcgcaatgcgcgccgacggtgaaacggctgtcgctggagctgggcggcaacgcg
ccgttcatcgtgttcgacgacgccgatctcgatgcggctgtcgagggcgcgatcgccgcc
aagtaccgcaacggcgggcagacctgcgtgtgcgcgaaccgcttctatatccaggacggc
atctatgacgccttcgccgggaagttcgccgcgcgcgtggcggagatgaaggttggcaac
ggcctggaagacggcgtggtcatcggtccgctcatcgaaggcaaggcagtggagaaggtc
gtgacgctggtcgaagacgccaagtcgcgcggcgcccgcgtactcgtgggtggcaacgcg
catgcgctgggtggcacgtactacgcgccgaccgtgattgccgacgccacttcgcaaatg
cgcgtggcgcgcgaggagattttcgggccggtcgcgccgctgttccgctttacgcgcgac
gtcgatgctatcgcactcgcgaacgacaccgaattcggcctcgccgcgtatctgtacacc
cgtgacatcgcgcgcgcctggcgcacggccgaggcgctcgagtacggcatggtcggcctg
aacacgggcctgatctcgaatgaagtcgcgccgttcggcggcatcaagcaatccggggtg
ggccgcgaaggctcgcactacggcatcgaggaatacctcgaactgaagtacctgtgcctg
caagtgtga
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