Pandoraea pnomenusa 3kgm: U875_06630
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Entry
U875_06630 CDS
T02936
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppk02000
]
U875_06630
Transporters [BR:
ppk02000
]
Other transporters
Pores ion channels [TC:
1
]
U875_06630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AHB05107
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All DBs
Position
1417871..1419985
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AA seq
704 aa
AA seq
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MALATLLSFAVVPAFGQTPGTVGNADASSADTASQATLKATTVTSSALRETPQNLKQPVQ
AGALGSRSQLDTPYSTTVVSQEQLEQRQPAKLGDVFVTDASVTDGSNAFDAWAGYIFVRG
MPIDWQSGFKLDGLPVMTYGVTMPYEQFDRVELLKGLSGFMYGFVAPGGVVNYVTKKPTD
ERIASVDVGFHSEGIWREHVDLGGRAGPNDMFGARLNYTHEEGRTYTDGNLNRDTVSVAL
DARITRDLTWNFGAMYQDRRATGTSPSLSTYNFSGTQLPGPVNVSNANLQTQATHLNTIT
QFYTTGLQYQINPDWKVSANYAYNKSTRDRNEATLYLLNGAGDFSGQNDLGDENNTFRAW
QVTAEGKVRTGPVTHQLTFGLASQYQTNDYAYLYSPSYTGNLYQGTSYQYYGDGTTLKAQ
RSSAIEQRSVFASDTVQLTERWSVLAGGRFTNYNQTNAQGVSTYSTNGVFTPTLAAMYKL
APNTTAYVSYVEALEAGEVVGSTYANAGAVLNPFKSRQYELGVKTEQSTWSTTASIFRIE
RGAVYTNSANARVADGQSIYQGIEIAGSVKLGPQWTLGASAMALDAWYARTANGFDGNRV
GGAPRFVLSGNVEYKIPYVPGLSVGGDIRYNGRTSLNPQNSLTVSGYTLINLGATYRTRV
AGKDVTLRAAVSNLTNRQYWEYQYDNYIKPADPRMISLNAKIDF
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ctggcactggccacgttgctgagctttgccgttgttccggccttcggacagacgccgggt
accgtcggcaatgccgacgcgagctcggccgacaccgcctcgcaggcgacgctcaaggcc
acgacggtgacgagttcggcgctgcgcgagacgccgcagaatctcaaacagccggtgcag
gccggcgcgctcggttcgcgcagccagctcgacacgccgtattcgaccaccgtcgtgagc
caggagcagctcgaacagcgccagcctgccaagctcggcgacgtgttcgtgaccgacgcg
tcggtgactgacggcagcaacgccttcgacgcctgggccggctacatcttcgtgcgcggc
atgcccatcgactggcagtccggcttcaagctcgacggcctgccggtgatgacctacggc
gtgaccatgccgtacgaacagttcgatcgcgtggaactgctcaaggggctgtccggcttc
atgtacggtttcgtcgctccgggcggggtagtgaactacgtgacgaagaagccgaccgac
gagcgtatcgcgagcgtcgacgtgggctttcattccgaaggcatctggcgtgagcatgtg
gatctcggcggccgcgcgggaccgaacgacatgttcggtgcgcgtttgaactacacgcat
gaagaggggcggacgtacaccgacggcaacctcaatcgcgacaccgtttcggtcgcgctc
gacgcgcgcatcacccgcgatctcacgtggaacttcggcgcgatgtatcaggatcggcgc
gccacgggcacgtccccctcgctctcgacgtacaacttctccggcacgcaattgcctggt
cccgtcaatgtgtccaatgcgaatctgcaaacgcaggccacgcatctgaacacgatcacg
cagttctacacgaccggtctccaataccagatcaatccggattggaaggtctcggcgaac
tacgcgtacaacaagtcgacgcgcgatcgcaacgaagccacgctgtatctgctcaatggc
gcgggcgacttcagcggccagaacgatctgggcgacgaaaacaatacgttccgcgcctgg
caggtcacggccgaaggcaaggtgcgcaccggcccggtcacccatcagttgacgttcggc
ctcgcctcgcagtatcagaccaacgactacgcctatctctacagcccgagctatacgggc
aatctgtaccagggcacgtcataccagtattacggcgacggcacgacgctcaaggcgcaa
cgttccagcgccatcgagcagcgctcggtgttcgcgtcggacaccgtgcaactgaccgag
cgctggtcggtgctcgcgggcggccgcttcacgaattacaaccagacgaacgcgcagggc
gtgtcgacctactcgaccaacggcgtgttcacgccgacgctcgccgccatgtacaagctc
gcgccgaacaccaccgcgtatgtcagctacgtcgaagcgctggaggcaggagaagtggtc
ggttcgacctacgcgaacgccggggcggtgctcaacccattcaagagccgccagtacgaa
ctcggcgtgaagaccgagcagtcgacgtggagcacgacggcgtcgatcttccgcatcgag
cgcggcgccgtctataccaacagcgccaacgcgcgcgtggccgacggtcagtcgatctac
caggggatcgagatcgcgggctcggtgaagctcggaccgcagtggacgctcggcgcgagc
gccatggcactcgatgcctggtacgcgcgcacggccaatggcttcgacggcaatcgcgtc
ggcggcgcaccgcgcttcgtgctctcgggcaacgtcgagtacaagattccgtacgtgcct
ggcctgtcggtcggtggcgacattcgctacaacgggcgcacgtcgctcaatccgcagaac
tcgctcacggtgtcgggctacacgctcatcaacctcggtgcgacgtatcgcacacgcgtg
gccggcaaggatgtgacgctgcgcgccgcggtgagcaacctgaccaatcgccagtattgg
gagtaccaatacgacaattacatcaagccggccgacccgcgcatgatcagcctgaacgcg
aagatcgacttctga
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