Pandoraea pnomenusa 3kgm: U875_07340
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Entry
U875_07340 CDS
T02936
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk03030
DNA replication
ppk03430
Mismatch repair
ppk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U875_07340
03430 Mismatch repair
U875_07340
03440 Homologous recombination
U875_07340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppk03032
]
U875_07340
03400 DNA repair and recombination proteins [BR:
ppk03400
]
U875_07340
Enzymes [BR:
ppk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U875_07340
DNA replication proteins [BR:
ppk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U875_07340
DNA repair and recombination proteins [BR:
ppk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U875_07340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHB05228
LinkDB
All DBs
Position
complement(1584894..1585634)
Genome browser
AA seq
246 aa
AA seq
DB search
MRQLILDTETTGLNPKTGDRLLEIGCVELVNRRLTGNNLHFYINPERDSDPGALAVHGLT
TEFLSDKPKFAEIAEELREYCRGAEIIIHNAAFDLGFLDMEFGRLGWPPFMEHCSGLIDT
LLRAREMFPGRRNSLDALCERLGVNNAHRTLHGALLDAELLADVYLAMTRGQESLVIDSG
DGDESDAGAHRERISLRQFELPVILAAAEEIELHGAVLDGIDKGIKGTCVWRTEPAAPEG
EATPAA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaactgatcctcgataccgaaaccaccgggctgaacccgaagacgggggaccgt
ctgctggagatcggttgcgtcgaactggtcaatcgccgcctgaccggcaacaacctgcat
ttctacatcaaccccgagcgcgacagcgatccgggggcactggcggtgcacggcctgacg
acggaattcctctccgacaagcccaagttcgcggagattgcggaagagctgcgcgagtat
tgccgcggcgccgaaatcatcattcacaacgccgcgttcgacctgggctttctcgacatg
gagttcgggcgcctcggctggccgcctttcatggagcactgctctggcctgatcgacacg
ctgctgcgtgcgcgggagatgttccctggtcggcgcaactcgctggatgcgctgtgcgaa
cgtcttggcgtgaacaatgcgcatcgtacgttgcacggcgcactgctcgacgcagaactg
ctcgccgacgtgtacttggcgatgacccgcggtcaggagagcctggtcatcgattcgggc
gacggcgacgaaagcgacgcgggcgcacatcgcgaaaggatctcgctgcgtcaattcgaa
ctgccggtcatcctcgcggcggctgaagagatcgaactgcacggcgcggtactcgacggc
atcgacaagggcatcaaagggacatgcgtctggcgcacggaaccggcagcgccggaaggt
gaagcgacgccggctgcgtga
DBGET
integrated database retrieval system
