Pandoraea pnomenusa 3kgm: U875_07935
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Entry
U875_07935 CDS
T02936
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk03420
Nucleotide excision repair
ppk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U875_07935
03430 Mismatch repair
U875_07935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppk03400
]
U875_07935
Enzymes [BR:
ppk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U875_07935
DNA repair and recombination proteins [BR:
ppk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U875_07935
MMR (mismatch excision repair)
Other MMR factors
U875_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHB05330
LinkDB
All DBs
Position
1727475..1729790
Genome browser
AA seq
771 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQQGHVSPAGILAVTF
TNKAAKEMQARLGAMLPISTRAMWIGTFHGLCNRMLRAHFRDAGLPQSFQILDQADQLSA
IKRMMKAANVDDEKYPPKNLQYFINNAKEQGLRPHEVEANDAFNQKFVELYSAYQEQCQR
EGVVDFAELLLRCFELLKHNEPLRVHYQTRFRHILVDEFQDTNKLQYAWLKMLAGSNAAV
FAVGDDDQSIYAFRGANVGNMADFEREFRVRHLIKLEQNYRSHGNILDAANALISNNARR
LGKNLRTDAGHGEPIRVYEAPTDLQEASWLVDEIKALVAQGLSRQDIAILYRSNAQSRVM
EHALVGAGIAYRVYGGLRFFERQEVKHALAYLRLIENPNDDTAFARVVNFPTRGIGARSL
EQLADAARLYNCSMYAAVPYMTGKAGTNLTAFVRLIEQMRHATERLTLPEVVTHVIDASG
LVAHYQTEKEGQDRIENLQELVHAATAFIAEEGYGLDAPARLIAMRPALPGAPDVLASPD
GVVDADTPVEMTPLAGFLSHASLEAGDNQAEAGQDAVQLMTVHAAKGLEFTAVFVTGLEE
GLFPHENSALELDGLEEERRLMYVAITRAKERLYLSFTQSRMLHGQTRYNIRSRFFDEIP
EEVLKFLTPRAQPGARLPQAEPAWGRDWFARPSAPKQDEWAATRSEKALADRSRASETGF
KLGQGVFHTKFGEGKIIGLEGTGDEARAHVKFGRHGEKWLALAVAKLQPIE
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaacctgaaccccgaacaactggccgccgtgacccttccggac
gagccggccctcattctggcgggggcgggttccggcaagacgcgcgtgctcaccacgcgc
atcgcctggctgatccagcaaggtcacgtgagcccggccggcatcctggcggtgaccttc
accaacaaggccgccaaggaaatgcaggcccgtcttggcgccatgttgccgatcagcacg
cgcgcgatgtggatcggcaccttccacggcctgtgcaaccgcatgttgcgcgcccatttc
cgcgacgccggactgccgcagagcttccagatcctcgatcaggccgatcagctgtcagcc
atcaaacggatgatgaaggcggccaacgtcgacgacgagaagtatccgccgaagaacctg
cagtatttcatcaacaacgccaaggagcagggcttgcgccctcacgaggtcgaggccaac
gatgccttcaaccagaagttcgtcgagctgtattcggcctatcaggagcaatgccagcgc
gagggcgtggtcgatttcgccgagctgctgctgcgctgcttcgagctgctcaagcacaac
gagccgctgcgggtgcattaccagacgcgcttccggcacatcctcgtcgacgagttccag
gacacgaacaagctccagtacgcctggctcaagatgctcgcgggttcgaacgccgcggtt
ttcgccgtgggcgacgacgatcagagcatctacgcgtttcgtggcgccaacgtcggcaat
atggccgacttcgagcgcgaattccgggtgcgccacctgatcaagctcgagcagaactac
cgctcgcacggcaatatcctcgatgcggccaacgcgctgatctcgaacaacgcacggcgt
cttggcaagaacctgcgcaccgatgcggggcatggcgagccgattcgcgtctacgaggcg
ccgacggatctccaggaagcgagctggctcgtcgacgaaatcaaggcgctggtcgcccag
ggcctgtcgcggcaggatatcgccatcctgtaccgcagcaacgcccagtctcgcgtgatg
gagcacgcgctcgtgggcgcgggcatcgcttatcgggtgtatggcggcctgcgctttttc
gagcgtcaggaagtcaagcacgcgctcgcctatctgcgtctgatcgagaatccgaacgac
gacaccgccttcgctcgcgtcgtgaatttcccgacgcgcggcatcggcgcccgctcgctc
gagcaactggccgacgccgcgcgtctgtacaactgctcgatgtacgcggcggtgccgtac
atgaccggcaaggcaggcaccaatctgacggcgttcgtgcgtctgatcgagcagatgcgt
cacgccacggagcgcctcacgctgcccgaagtcgtcacgcatgtgatcgacgcgagcggg
ctggtggcgcactatcagacggagaaggaagggcaggatcgcatcgagaacctgcaggag
ctcgtgcacgccgccaccgcgttcattgcggaggagggctatggactcgatgcgccggca
cggctgatcgcgatgcgtccggcgttgcccggtgcgcccgacgtgctggcgtcgcccgac
ggcgtggtcgacgccgacacgccggtcgagatgacaccgctggccggattcctgtcgcat
gcgtcgctcgaagcgggtgacaaccaggccgaagccggacaggacgcggtgcagctcatg
accgtgcacgcggccaagggcctggagttcacggccgttttcgtcaccggcctggaagag
gggctgttcccgcacgagaacagtgcgctcgaactcgacgggctcgaggaagagcgccgg
ctgatgtacgtggcgatcacacgcgcgaaggagcgcctctacctgtcgttcacgcaaagc
cgcatgctccacggccagacgcgatacaacattcgctcgcgcttcttcgacgaaattccc
gaggaagtcctcaagttcctcaccccgcgtgcccagccgggcgcgcgcttgccgcaggcc
gagccggcctgggggcgtgactggtttgcgcggccgagtgcgccgaagcaggacgagtgg
gcggccacccggtcggaaaaggcgctggccgatcggtcgcgtgcctccgagaccggcttc
aagctgggtcagggcgttttccacaccaagttcggcgagggcaagatcatcggtctggag
ggcacgggcgacgaagcgcgggcgcatgtgaagttcggccgtcacggcgagaaatggctg
gcgctggctgtggcgaagttgcaaccgatcgagtga
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