Pandoraea pnomenusa 3kgm: U875_08320
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Entry
U875_08320 CDS
T02936
Name
(GenBank) Fis family transcriptional regulator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppk03000
]
U875_08320
Transcription factors [BR:
ppk03000
]
Prokaryotic type
Helix-turn-helix
Other families
U875_08320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
HTH_8
PAS_4
AAA_5
PAS
AAA
PAS_8
Mg_chelatase
AAA_16
AAA_7
AAA_2
DUF6262
HTH_23
HTH_7
PAS_9
nSTAND6
HTH_30
AAA_22
TIP49
PAS_7
NACHT
HTH_psq
nSTAND3
AAA_3
DUF815
DUF8560
Motif
Other DBs
NCBI-ProteinID:
AHB05400
LinkDB
All DBs
Position
complement(1820300..1822312)
Genome browser
AA seq
670 aa
AA seq
DB search
MIWAVGISKLGELYRDIVPDYTAVADVQIIDKGYEAVIDALARLPAGSVDGIVAAGSNGA
FLRERVALPVVLVKVTGFDVMHALARARRALPSPSPASRIALVSYARPAAEFERFKSAFH
LDIPQHAYHDAHDAEDLVHRLRDEGMEVIVGPGLVTELAERAGLTGVFLYSQDSVRAAFD
TALEVARFGRIEAQRRERLDTVLRHLHEGVAAVDLDGRVEAINASMAGMLGVNAIDAVGR
PLDAIAPALDISRTLESASAELEAIVSMAGKTWVVNRIPLLDQGTLTGALLTCQDSQAFA
RVDRSLRSRHRPRHLVARYRLDDLIGDSAAMTQVRALARRYAQTDSTVLVHGESGTGKEL
LAQGIHNASRRRDYPFVAINCAAFPETLLESELFGYEDGAFSGARRGGKAGLFETAHNGT
IFLDEIGEMPMPLQTRLLRVLQEREVLRLGATEPVPCDVRVIAATHRDLRQQVAAGLFRE
DLYYRLNILRMVLPPLRERMDDLPRLTPLFLERALARAGARMSVEALQASLLPLLATYRW
PGNVRELENLLERIAVVCADVVEAREIDRARLVEIAPELDPAGGAPLRIDAPASPDVPPT
HGGRQVGEPEVRQTGAAPLAQTGRARRAAEELARIRATLAACGGDRGAACEALGISRSTL
WRKLREHPGN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgatctgggcggtgggcatcagcaagctcggcgaactctatcgcgacatcgtgcccgat
tacacggccgtcgccgacgtccagatcatcgacaaaggctacgaagccgtgatcgacgcg
ctggcgcggctgcccgcgggcagcgtcgacggtatcgtcgcggcgggctcgaatggcgca
ttcctgcgcgagcgcgtcgcactgcccgtcgtgctcgtgaaagtcaccggcttcgatgtc
atgcacgcgctcgcccgggcgcgccgcgcactgccctcgccatcgcctgcgtcgcgcatc
gcgttggtgtcgtatgcacgcccggccgccgaattcgaacgcttcaagagcgcgtttcat
ctcgatatcccgcagcatgcctatcacgacgcgcatgacgccgaagacctcgtgcatcga
ctgcgcgacgaaggtatggaagtcatcgtcggccccggcctggtgaccgaactggccgag
cgcgcggggctcacgggcgtgtttctctattcgcaggactcggtgcgcgcggcgttcgac
acggcgctggaagtcgcgcgcttcggacgcatcgaagcgcagcggcgcgagcgtctcgac
accgtgctccgacatctgcacgaaggcgtggccgccgtcgacctcgatggccgggtggag
gcgatcaatgcgtcgatggccggcatgctcggcgtgaatgcgatcgacgccgtcggccga
ccgctcgacgccatcgcgccggcactggacatttcccgcaccctggagagcgcgagcgcc
gaactcgaggcgatcgtttccatggcgggcaagacgtgggtcgtcaaccgcatcccgctg
ctggatcagggcacgctcacaggcgcgctcctcacgtgccaggactcgcaagcgtttgcg
cgtgtggaccgttcgctgcgttcgcgtcaccgcccgcgacaccttgtggcgcgctaccgg
ctcgacgatctgatcggcgactcggctgcgatgacgcaggtgcgcgcgctggcgcgccgc
tacgcccagacggattcgaccgtgcttgtgcacggcgagagcggcaccggcaaggaattg
ctcgcgcagggcatccacaacgccagtcgacgacgcgactatcccttcgtggcgatcaat
tgcgcggcgtttcccgagacgctgctcgagagcgagctcttcggctatgaagacggcgcg
ttctccggcgcgcggcgcggcggcaaggccggcctgttcgagacggcccacaacggcacg
atctttctcgacgaaatcggcgaaatgccgatgccgctgcaaacgcgcctgctgcgcgtg
cttcaggagcgcgaggtgctgcggctcggtgcgaccgaaccggtgccgtgcgacgtgcgc
gtgatcgccgcaacgcaccgcgaccttcggcagcaggtggccgccggtctgttccgcgaa
gacctgtattaccggctcaacatcctgcgcatggtgctgccgccgttgcgcgagcgcatg
gacgacctgccacgcctcaccccgctctttctggagcgcgccctcgcgcgcgccggcgcg
cgcatgagcgtcgaagccctgcaggcgtcgctactgccactgctggcgacttatcgctgg
cccggcaatgtgcgcgaactggaaaatctgctcgagcgcattgcggtcgtctgcgccgat
gtggtggaggcgcgtgagatcgatcgcgcacggctggtcgagattgcaccggaactcgat
ccggcgggtggcgcccccctgcgcatcgatgcgccggcgtcgcccgatgttccccccacg
cacgggggacggcaagtcggcgagcccgaagtgcgacagaccggcgccgcgccactggcg
cagaccgggcgcgcccgacgcgccgccgaggaactggcacgcattcgcgccacgctcgcg
gcgtgcggcggcgaccggggcgccgcctgcgaggcgctgggcatcagccggtcgacgcta
tggcgaaagctgcgcgagcatcccggcaactga
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