Pandoraea pnomenusa 3kgm: U875_08540
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Entry
U875_08540 CDS
T02936
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U875_08540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppk02000
]
U875_08540
Transporters [BR:
ppk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
U875_08540
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AHB05438
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All DBs
Position
1867078..1867893
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AA seq
271 aa
AA seq
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MNRQDPQYDRNGLGAMVFHGLFLLFILAPLVVVCLVAFTPDNFLSIPTQHFSLRWFASLM
DDEDFQSALRTSLWLGVASASVSTALAVPAAMGLARYRFPGRDAINSFLLSPLMIPPVVL
GIAFLRLFTLLDMGGSFVSLVACHALLIFPYALRLIMAALVGQADEAERAARSLGAGRWT
TFRRVTLPAILPGVAGGWVLAFINSFDELTATIFVTSPTTITLPVRIYMNMSETVDPSVA
AISTLLIGLTLAVMLVLDRIYGLNKVLVGNH
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgacaagatcctcagtacgaccgcaatggtctcggggccatggtgttccatggg
ctgttcctgcttttcattctggcgccgctggtcgtggtttgcctggtcgccttcacgccc
gacaacttcctctcgatcccgacacagcacttctcgttgcgctggttcgcgtcgctcatg
gacgacgaggacttccagtcggcgttgcgcacgagcctttggctcggggtggcgtcggcg
agcgtgtcgaccgcgctggccgtgcccgcggcgatggggcttgcgcgctaccgtttcccg
gggcgcgatgcgatcaattcgttcctgctctcgccgctgatgattccgccggtggtgctg
ggcatcgcgttcctgcgactgttcacgttgctcgacatgggcggatcgttcgtgagcctg
gtggcgtgccatgcgttgctcatcttcccttacgcgttgcggctgatcatggcggcgctg
gtggggcaggcggacgaagccgaacgcgcggcacgctcgctcggcgccgggcgctggacc
acgttccgtcgcgtcacgctgccggcgatcctgccgggggtcgcgggcgggtgggtactg
gcgttcatcaacagcttcgacgagttgacggccacgatcttcgtgacgtcgcccacgacg
atcacgctgccggtgcgcatctacatgaacatgagcgagacggtcgatccgagcgtggcg
gcgatctccacgctgctcatcggactgacgctggcggtgatgctggtgctcgaccgtatc
tacggattgaacaaggttctggttggaaatcactaa
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