Pandoraea pnomenusa 3kgm: U875_09360
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Entry
U875_09360 CDS
T02936
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U875_09360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppk02000
]
U875_09360
Transporters [BR:
ppk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
U875_09360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AHB05578
LinkDB
All DBs
Position
2042288..2043334
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AA seq
348 aa
AA seq
DB search
MKLSRKVVMCAAALALGASSAAWSQSKTLYVGMNGGSMEKAYTSQVFPEFEKANNVKVVV
VPGTSSDVLAKLLANRNSPQLHVVFLDDGVMARAIAMGVCQKLDDSPVLKELMPSARVKD
DMAAGVQLGMTGIGYNTKIFKEKGWAAPTSWTDFADPKYKGKVVFQSASSSTFGLHGFLA
LNRIWGGSETNVEPGFSKWATTVGPNVVEYIPNSAKLSEMIQTGEAAIFPLTPTAVSELQ
EKGIPVAYVAPKEGAVQLLVDLCVVKNSPDNAMAQKLAQYLLSARGQTLAAAAGAYIPTN
TQATMPPAMQKRLGKIDDLVKNLKTVDWDAINQRRAQWDQRWNRQIEQ
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatcccgaaaggtcgtcatgtgcgctgcggcgctggcattgggcgcgagcagc
gcggcctggtcgcagtccaaaacgctttacgtcggcatgaacggcggctcgatggaaaag
gcttacacaagtcaggtctttccggaattcgagaaggccaacaacgtgaaggtcgtggtc
gtgcccggcacgtcgtccgatgtgctcgccaagctgctggccaaccggaacagcccgcaa
ctgcatgtcgtgttcctcgacgacggggtgatggcgcgtgccatcgccatgggcgtttgc
cagaagctcgacgactcgccggtgctcaaggagctcatgccgtcggcccgcgtgaaggac
gacatggccgcgggtgtgcaactgggcatgaccggtatcggctacaacaccaagatcttc
aaggagaagggctgggcggcaccgacgtcgtggacggacttcgccgacccgaagtacaag
ggcaaggtggtgtttcagtcggcgtcgagcagcacgttcggcctgcatggcttcctcgcg
ctcaaccggatctggggtggcagcgagacgaacgtcgagccgggcttcagcaagtgggcg
accaccgtggggccgaatgtcgtcgagtacatcccgaactcggccaagctctcggaaatg
atccagaccggcgaggcggcgatcttcccgctcacgcccacggccgtgagcgaactccag
gaaaagggcattccggttgcgtacgtcgcgcccaaggaaggcgccgtgcaattgctggtt
gacctgtgcgtggtcaagaacagcccggacaacgcgatggcgcagaagctcgcgcagtat
ctcctctcggcccgcgggcagacgctggccgccgcggcgggcgcctatatcccgaccaat
acgcaggccaccatgccgcccgccatgcaaaagcgcctgggtaagatcgacgacctggtc
aagaacctcaagacggtggactgggacgccatcaaccagcgccgcgcacagtgggatcag
cgctggaatcgacagatcgagcaataa
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