Pandoraea pnomenusa 3kgm: U875_09470
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Entry
U875_09470 CDS
T02936
Name
(GenBank) type II restriction endonuclease subunit M
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00270
Cysteine and methionine metabolism
ppk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
U875_09470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppk03000
]
U875_09470
03032 DNA replication proteins [BR:
ppk03032
]
U875_09470
03036 Chromosome and associated proteins [BR:
ppk03036
]
U875_09470
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ppk02048
]
U875_09470
Enzymes [BR:
ppk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
U875_09470
Transcription factors [BR:
ppk03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
U875_09470
DNA replication proteins [BR:
ppk03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
U875_09470
Chromosome and associated proteins [BR:
ppk03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
U875_09470
Prokaryotic defense system [BR:
ppk02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
U875_09470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AHB05593
LinkDB
All DBs
Position
complement(2061867..2063549)
Genome browser
AA seq
560 aa
AA seq
DB search
MIRDQFLLDISSELIVDNFAGGGGASCGIELALGRHVDHAINHDPEAVAMHVMNHPQTEH
HCESVWDVDPLALTQGRPVGLAWFSPDCKHFSKAKGGKPRDKKIRGLAWVAMRWAALVRP
RVIMLENVEEFRTWGPVLADGSPCPRRKGQTFRSFVRQLEALGYVVEHRELRACDYGAPT
IRKRLFLIARCDGKPIVWPEPTHGAPESAAVIAGLRKPWRTAAECIDWSIPCPSIFERAK
PLADATQRRIARGIRRYVIDSADPFIVKVNHGYDYFRGQPLGDPLQTITAKQGYGIVAPV
LTECANASTQRSWAADEPLRTQCAEVKGGHFALASATLVQTGYGERPGQAPRAPGLDKPL
GTVVAGGAKHALVSAFLAKHYGGNYEGPGVGLDEPASTVTTTDHHALVSSHLGKLRGECT
GSATAEPVPTISAQGNHIGEVRAFLVKYYSEGGQDQDCRDPMHTIPTKDRLGLVTVAGEQ
YQIADIGMRMLEPHELYAAQGFPASYVIAPVFNGKRMPKHAQVRMCGNSVSPPMAAALVR
ANVPEMAAWTARERRVGVAA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagaccagttcctgctggacatttccagcgagctcatcgtcgacaacttcgcc
ggcggcggcggtgcgagctgtggcattgagctcgccctcggccgccacgtcgaccacgcc
atcaaccatgatcccgaggccgtggcgatgcatgtcatgaaccacccgcagaccgagcac
cattgcgaatcggtgtgggacgtggatccgctcgcgctgacgcaagggcgtcccgtgggc
ctcgcctggttctcgcccgactgcaagcacttcagcaaggccaaaggcggcaagccgcgc
gacaagaaaattcgaggcctcgcatgggtggcgatgcgctgggctgcgttggtgcgcccg
cgcgtcatcatgctcgagaacgtcgaggaattccgtacctggggcccggtgctcgcggat
ggctctccctgcccgcggcgcaaaggtcagaccttccgttcgttcgtgcgtcagcttgaa
gccttgggctatgtggtcgagcaccgcgagctgcgcgcgtgcgactacggcgcgcccacg
atccgcaaacgcctgttcctgatcgcgcgctgcgacggaaagccgattgtctggcccgag
ccgacacacggtgcgccggagagcgctgcggtgatcgccggcctgcgcaaaccatggcgc
acggctgccgagtgcatcgactggtcgatcccctgcccctcgatcttcgagcgtgccaag
ccgctcgcagacgccacgcagcgacgcatcgcacgaggcatccgccgctatgtcatcgac
tcggcggatccgttcatcgtgaaggtgaaccacgggtacgactatttccgtggccagccg
cttggtgacccgctgcaaaccatcacggcgaagcaaggttacggcatcgtcgcgccggtg
ctaacggagtgcgcgaacgcgtcgacgcagcgatcgtgggcggccgatgagccgctgcgc
acccagtgcgccgaggtcaagggcggccacttcgctctcgcgtccgccacgctggtgcag
accggctacggcgagcgtcccggccaggcgccgcgcgcgccggggctcgacaagccgctc
ggcacagtcgtggccggcggcgccaaacacgcgctggtgtcggctttccttgccaagcac
tacggcgggaactacgaggggccaggcgtcggccttgatgaaccggccagcacggtcaca
accaccgatcatcacgcgctggtctcgtcgcacttgggcaagctgcgcggtgaatgcacg
ggaagcgctaccgcagagccggtgccgacgatctcggcccagggcaaccatatcggcgag
gtccgcgccttcctggtgaagtactacagcgagggcggccaggatcaggattgccgtgac
cctatgcacacgatcccgaccaaggaccgtctcggcctggtcaccgtcgccggcgagcaa
taccagatcgccgacatcggcatgcgcatgctcgagccgcatgagctgtatgcggcgcag
ggcttccccgcttcctacgtcatcgcgcccgtgttcaacgggaagcgcatgccgaagcac
gcccaggtgcgcatgtgtggcaacagcgtcagtccgccgatggctgccgcactcgtgcgc
gcgaacgtgccggaaatggcagcatggacggcgagggaacgccgtgtgggggtggcagca
tga
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