KEGG   Pandoraea pnomenusa 3kgm: U875_10005
Entry
U875_10005        CDS       T02936                                 
Name
(GenBank) helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
ppk  Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:ppk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppk03400]
    U875_10005
Enzymes [BR:ppk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     U875_10005
DNA repair and recombination proteins [BR:ppk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    U875_10005
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Helicase_C Glyco_tran_10_N
Other DBs
NCBI-ProteinID: AHB05664
LinkDB
Position
2160779..2163007
AA seq 742 aa
MTDSAAPSDSPDASLSPDAPTFHGLKPLAAKRERELQEIFGEGGMLARAIDGYRSREPQT
EMARAVAAAMDTHDTLIAEAGTGTGKTYAYLVPAMLWGGKTIISTGTKHLQDQIFARDIP
TVRKALAVPVTVAMLKGRANYLCHYYLERAQQEGRFASRHEAAQLREITTFAQITHSGDK
AELASVPENSPIWAQVTSTRDNCLGQECPRYKDCFVMQARKEAQQADIVVVNHHLFFADV
MLRDTGMAELLPSANTVIFDEAHQLPETATLFFGETVSTGQLLELARDCVAEGLIHARDA
ADWVRLGASLERAARDVRLTFGQDNVRMSVAQLADDHELFGALDAVDLALQDMIETLQHQ
AERAEALGACARRAVELHQQLERWQMGVTPPTPGETPLPLLDPEAPRVTDGKREKAARAR
EAEAARVAAEAKAAQQAEAGQGEGSEPKTYAPPETVRWIEVFSQAVQLHQTPLSIAPIFA
KQRAGAPRAWIFTSATLSVKGNFMHYAAQLGLDAGKSLTLASPFDYPNQSLLYVPRGLPQ
PSAPGFTDAVLDAALPVLEVSGGRAFVLCTTLRAVNRAAERLRDEFERRGWTYPLLVQGE
ASRTELLDRFRALGNAVLIGSQSFWEGVDVRGEALSLVIIDKLPFAPPDDPVLAARLDAL
TKKGLSPFAVHQLPQAVITLKQGAGRLIRSEGDRGVLMICDPRLVDKPYGRRIWQSLPPF
KRTRELPIVRGFFDEIAASANG
NT seq 2229 nt   +upstreamnt  +downstreamnt
ttgaccgattccgccgcacccagcgattcccctgacgcttccctgagccccgacgcaccc
actttccatggactcaagccgctcgccgccaagcgcgagcgcgagttgcaggagatcttc
ggcgagggcgggatgcttgcgcgcgcgatcgacggctaccgctcgcgtgaaccgcagact
gaaatggcgcgcgccgtggcggccgccatggacacgcacgacacgctgatcgccgaggcc
ggaacgggcacgggcaagacctacgcctatctcgtgcccgccatgttgtggggcggcaag
accatcatttcgaccgggaccaagcacctgcaggatcagatcttcgcgcgcgacattccg
accgtgcgcaaggcgcttgccgtgccggtcaccgtggccatgctcaagggccgcgcgaac
tacctctgccactattatctggagcgtgctcagcaggaaggccgcttcgcgtcgcggcac
gaagcggcgcagttgcgcgagatcaccacgttcgcgcagatcacgcacagcggcgacaag
gccgaactggcgtcggtgcccgagaattcgccgatttgggcgcaggtcacgtcgacacgc
gataactgccttggccaggaatgtccgcgctacaaggactgcttcgtgatgcaggcgcgc
aaggaggcgcagcaggcggacatcgtcgtggtgaaccatcacctgttcttcgccgatgtg
atgctgcgcgacacggggatggccgagttgctgccaagcgcgaacacggtgatcttcgac
gaagcccatcagttgcccgaaaccgcgacgctcttcttcggtgaaacggtttcgacggga
cagttgctggaactggcgcgcgactgcgtggccgagggcctgatccatgcgcgcgacgca
gccgactgggtcaggctcggcgccagtctcgagcgtgccgcgcgcgacgtgcgcctgacg
ttcgggcaggacaatgtgcgcatgtcggtggcgcaacttgcggacgatcacgaactgttc
ggtgcgctcgatgcggtggatctcgccctgcaggacatgatcgagacgcttcagcaccag
gccgaacgggccgaagcgctgggggcatgcgcgcgccgcgccgtggaactgcatcagcag
ctcgagcgatggcagatgggggtgacgccacccacgccaggcgagacgccgttgccgctg
ctggatcccgaggcgccgcgcgtgaccgacggcaaacgcgagaaggccgccagggcgcgc
gaggcggaggcggcccgcgtggccgccgaagcgaaggccgcgcagcaagccgaggcgggg
caaggcgagggcagcgagccgaagacgtatgcgcccccggagaccgtccggtggatcgaa
gtgttttcgcaggcggtgcaactgcatcagacgccgctatcgattgcccccattttcgcc
aagcagcgcgcaggcgcgccgagggcgtggatcttcacgtcggcgacgttgtcggtgaag
ggcaatttcatgcactatgcggcgcaactggggctcgatgcgggcaagtcgctcacgctc
gccagtccgttcgactatccgaaccagagcctgctgtatgtgcctcgtggcttgccgcag
ccgtccgcgccgggctttaccgacgccgtgctcgacgccgccttgccagtgctcgaggtg
agcggcgggcgcgcgttcgttctgtgcacgacgttgcgcgccgtgaatcgtgcggcggag
cgcctgcgcgatgaattcgagcggcgcggctggacgtatccgttgctcgtgcagggcgag
gcgagccgaaccgagttgctcgaccgtttccgcgcgctcggcaacgcggtgctcatcggc
agccaaagcttctgggaaggggtggacgtgcgcggtgaggcgttgtcgctggtcatcatc
gacaagctgcccttcgcgccacccgacgatcccgtgttggctgcgcgtctggacgcgctg
acgaagaaggggctcagtccgttcgccgttcatcaattgccgcaggccgtgattacgctc
aagcagggggcggggcgactgatccgctccgagggggatcgcggggtgttgatgatctgt
gacccgcgtcttgtcgacaagccttacgggcgccgtatctggcaaagtctgccgccgttc
aagcggacccgggaactgcccatcgtgcgcggctttttcgacgagatcgccgccagcgcg
aacggttga

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