Pandoraea pnomenusa 3kgm: U875_10420
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Entry
U875_10420 CDS
T02936
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppk03032
]
U875_10420
03036 Chromosome and associated proteins [BR:
ppk03036
]
U875_10420
03400 DNA repair and recombination proteins [BR:
ppk03400
]
U875_10420
DNA replication proteins [BR:
ppk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
U875_10420
Chromosome and associated proteins [BR:
ppk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
U875_10420
DNA repair and recombination proteins [BR:
ppk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
U875_10420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
AHB05733
LinkDB
All DBs
Position
2266330..2266602
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIEHIAGEADISKAAAGRALDAMVGAVKKALKKGDDVTMVGFGTFYVAKRAARAG
RNPRTGDVIKIKAAKVPKFRPGKDLKDTIN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagacggaactgatcgaacatatcgcgggtgaggccgacatttcgaaagcggcc
gcgggtcgagcacttgacgcaatggtgggagcagtaaagaaggcgctgaagaagggtgat
gacgtaacgatggtgggcttcggcacgttctacgtggccaagcgcgcagcgcgcgcaggg
cgcaatcctcgcaccggcgatgtgatcaagatcaaggcagcgaaggttccgaaatttcgc
cctggcaaagatttgaaagatacgataaactaa
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integrated database retrieval system
