Pandoraea pnomenusa 3kgm: U875_11895
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Entry
U875_11895 CDS
T02936
Name
(GenBank) hypothetical protein
KO
K21089
MerR family transcriptional regulator, activator of the csg genes
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppk03000
]
U875_11895
Transcription factors [BR:
ppk03000
]
Prokaryotic type
Helix-turn-helix
MerR family
U875_11895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
RE_SinI
PLU-1
DUF6707
Motif
Other DBs
NCBI-ProteinID:
AHB05988
LinkDB
All DBs
Position
complement(2589897..2590877)
Genome browser
AA seq
326 aa
AA seq
DB search
MEDTVNSVRRYRSGEAAKLVDMPAATLRIWEQRYGVISPPTSASGQRLYSDVDVSRLRTI
KSLVDKGHAISAIAHLDNAQLGRLASGAAVAAASVDASHGANLFIVGFGEGVSIELPEGV
THQAFHQAEEIPVAEDSSGTPRGMVVRVEALHEDTVMSVVAAARRAHCDHVLVVYAFGTR
RAVDLARLEGMQLARTSDALLHAHDVLFDFVQSMAYKDGVGSSRERLWSRSPRRFDEATL
TRLAQQSTTIACECPKHLVELVMQIAAFERYSDECVSRSAADALLHQHLGDAANRAVALF
EDALAAVVEQEGWSVPAAAPRHMSED
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggaagacacggtgaattcagttcggcgttatcgaagtggcgaggccgcaaagctcgtc
gacatgccggccgccacgttgcggatctgggaacagcgatatggcgtgatttcgccgccc
acgagtgcctcggggcagcgtctttattccgacgtcgatgtgagccgtctgagaacgatc
aagtcgctggtcgacaagggccacgcgatcagcgccatcgcgcatctcgacaacgcgcag
ttgggccgattggcgagtggcgccgccgtggccgccgcttcggtggacgcgtcgcacggc
gccaatctcttcatcgtgggctttggcgaaggcgtctcgatcgagttgcccgagggcgtc
acgcatcaggcatttcatcaagccgaagagattcctgtcgccgaagattcgagcggcacg
cctcgcggcatggtcgtgcgggtcgaggcgctgcacgaagacacggtgatgtccgtcgtc
gcggcggcgcgtcgggcgcattgcgatcacgtgcttgtcgtctacgcattcggcacgcgg
cgtgccgtcgatcttgcgcgccttgaaggcatgcagctcgcgcgcacgtccgatgccctg
ctccatgcccacgacgtacttttcgatttcgtgcagtcgatggcgtacaaggatggcgtc
ggctcgagtcgggaacggctctggtcaaggtcgccgcgccggttcgatgaagccaccctg
acccgactggcgcaacagtcgacgacgatcgcttgcgaatgtccgaagcacctggtcgag
ttggtgatgcagatcgccgccttcgagcgctacagcgacgaatgcgtgtcgcgctccgcc
gccgacgccctgctccaccagcatctgggcgatgccgccaaccgtgccgtggcgctgttc
gaagacgcgctggccgcggttgtcgagcaagagggctggtcggtgccggcggccgctcca
cgccacatgtccgaggactga
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