Pandoraea pnomenusa 3kgm: U875_12095
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Entry
U875_12095 CDS
T02936
Name
(GenBank) excisionase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00020
Citrate cycle (TCA cycle)
ppk00630
Glyoxylate and dicarboxylate metabolism
ppk01100
Metabolic pathways
ppk01110
Biosynthesis of secondary metabolites
ppk01120
Microbial metabolism in diverse environments
ppk01200
Carbon metabolism
ppk01210
2-Oxocarboxylic acid metabolism
ppk01230
Biosynthesis of amino acids
Module
ppk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppk_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
ppk_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
U875_12095
00630 Glyoxylate and dicarboxylate metabolism
U875_12095
Enzymes [BR:
ppk01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
U875_12095
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Ortholog
Paralog
GFIT
Motif
Pfam:
Citrate_synt
HTH_17
MerR_1
MerR
Sigma70_r4_2
HTH_23
HTH_8
AbiEi_4
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AHB06022
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Position
complement(2632062..2633267)
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AA seq
401 aa
AA seq
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MNYFTAAQAAERLGVSLQTLYAYVSRGLLHAEPGKTHRERRYRVADVERLAAQRTRGRKP
REVAKAALDWGMPVLESSITLIEDGRCYYRGRDALTMAESTSVEATAAWLWQCDEATAFA
AREDRECGPDDWPALLLDRYRGQRAESALLPAFTVASDDTATGIWQRDATRVARGSAELL
RLMTACLLGTTPSDAPVHEQCAHAWGVRDASGADLIRMALVLCADHELNASSFTARCVAS
TGASLRAAVVAGLSALTGGRHGGTTARNEAMWDEVGETHVAARLRERLARGEKLPGFGHH
LYPAGDVRASAMLARVLPSHPTWQTMIEAADTLVGQRPSLDFALVAVRRHLGLPVGSAFG
LFALGRTIGWIAHALEQRESTRLIRPRAAYVGVRPAPISRV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaactacttcaccgccgcacaggccgccgagcgtcttggcgtgtccctccagacgctt
tatgcctacgtaagccgtggattgcttcacgccgagcccggtaaaacgcaccgcgagcgc
cgctatcgcgtcgccgatgtcgagcgtctggcggcgcaacgcacccgtggtcgcaagccc
agggaggtcgccaaggcggcgttggactgggggatgccggtgctcgagtcctcgatcacg
ctgatcgaggacggacgatgctactaccgggggcgtgatgccctgacgatggcggagtcg
acctcggtcgaagccacggcggcgtggttgtggcaatgcgacgaggcaacggcgttcgcc
gcgcgcgaggaccgcgaatgcggcccggacgattggcccgccttgctgctcgatcgatat
cgcgggcaacgtgccgaatcggcgttgctgccggcatttacggtcgcgagcgacgatacc
gccacaggcatctggcagcgcgatgcgacgcgtgtcgcgcggggaagcgccgaactgctg
aggttgatgacggcctgcctgctgggcaccacgccgagcgacgcccccgttcacgagcaa
tgcgcgcacgcgtggggcgttcgcgatgcgtcgggggcggatctgattcgcatggcgctg
gtgctgtgtgccgatcacgagttgaacgcgtcgagctttacggcgcgttgcgtggcatcg
acgggcgccagcctgcgcgcggcggtcgtcgccggtctgtcggcgctgaccggggggcgt
cacggcggcaccaccgcgcgcaacgaggcgatgtgggatgaggtgggcgagacgcacgtt
gccgcgcgcctgcgagagcggctcgcgcgtggtgagaagctgcctggcttcgggcatcac
ctttatccagccggtgatgttcgcgcgagcgcgatgcttgcgcgggtgctgccgtcgcac
ccgacatggcagaccatgatcgaagcggccgacacgttggtcgggcagcgcccgtcgctc
gatttcgcgctggtggcggtgcggcgtcacctcgggctgccggtgggctcggcgttcggc
ctgttcgcgctgggccgcaccattggctggatcgcccatgcgcttgagcaacgcgaaagc
acccgcttgattcgcccgcgcgcggcgtacgtgggcgtaagacccgcgccgatctcccgc
gtgtga
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