Pandoraea pnomenusa 3kgm: U875_12345
Help
Entry
U875_12345 CDS
T02936
Name
(GenBank) ABC transporter
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk02010
ABC transporters
ppk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U875_12345
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U875_12345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppk02000
]
U875_12345
Transporters [BR:
ppk02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
U875_12345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_29
SMC_N
AAA_30
AAA_22
AAA_16
MukB
Biliv-reduc_cat
AAA_23
MMR_HSR1
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AHB06068
LinkDB
All DBs
Position
complement(2695823..2697763)
Genome browser
AA seq
646 aa
AA seq
DB search
MRVTTKLAAIVGIVALFGFPVAVSNPYYIHMIETIMIYAILLFGLDIVVGYTGQVSLGHA
GLFGIGAYVAGVFFAKLGLSFWFALPAAILITAAFGAILALPALRVIGPYLAMVTLAFGT
IIQILINEMDFLTSGPMGITLTKPVIGGHPIDEVEYYWLVAVLLLVSILVAHRILKSHLG
RAFEALRDSPVASDCMGVSVYRYKVYAFVISAGFAGLAGSLYAYSEQYISPNTYNFELTI
LFLLAVIMGGRKTRSGSLLGAAIIVLLPQLLDDIGIFRIVATVIAALTTVVAVTAIAKAR
TTLAKAAVPVVGTVGLAAVTWWLDSITDWRLTIFGLMILFVVYYLPDGIVGFLRSRILHR
RRTLSVSATQVDESAGGDTDPVLMAAASGPDELLKVRQLLMQFDGLKALNQVDLTVRRGT
IHGLIGPNGSGKSTMMNVLTGIYVPTAGSIEFAGQSLAGRTSSDIALSGVARTFQNVQLF
GEMTALENVLVGLHHTFASTLVDVSLRLPRYKREETGARARAMRLLEFVGLASLADEEAR
NLPYGKQRLLEIARALALDPRLLLLDEPAAGLTAPDIRELLAIIRKIRDHGITVILIEHH
MDVVMSTCQTVSVLDFGQKIAEGLPAQIQADEKVIEAYLGGASTTH
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
ctgcgcgtgaccacgaagctcgcggcgatcgtgggtatcgtcgcgctgttcggcttcccc
gttgccgtcagcaatccgtactatatccacatgatcgaaacgatcatgatctatgcgatc
ctgctcttcgggctggatatcgtcgtgggttatacggggcaggtatcgctgggccatgcc
gggttgttcggtatcggcgcatacgtggcgggggttttcttcgccaagctcgggctgtcg
ttctggttcgcgctgccggcggccattctgattacggcggcgttcggggcgattctcgcg
ttgccggcattacgcgtgatcggcccgtatcttgccatggtgacgctcgccttcggcacc
atcatccagattctcatcaacgagatggacttcctgacgtcggggccgatgggcatcacg
ctcacgaagccggtcatcggcgggcatccgatcgacgaagtcgagtactactggctcgtc
gcggtgctgctgctcgtcagtattctcgtggcgcaccggattctgaagtcgcacctcggc
cgcgccttcgaagcgttgcgcgactcgccggtggcgtcggactgcatgggcgtgtcggtg
taccgctacaaggtctacgcgttcgtgatcagcgccggtttcgcggggctggcgggaagt
ctctacgcctattcggagcagtacatctcgccgaatacgtacaacttcgaactcacgatc
ctgttcctgctggccgtgatcatgggcgggcgcaagacccgctccggttcgctgctgggt
gcggcgatcattgtgctgctgccgcaactgcttgacgacatcggcatcttccgtatcgtt
gccacggtcatcgcggcgttgacgacggtggtcgccgtgacggcgattgccaaggcgcgc
accacgctggccaaggccgccgtgccggtcgtcggcaccgtggggctggccgcggtgaca
tggtggctcgacagcatcacggactggcgtctgacgatcttcggtctgatgattctgttt
gtcgtgtactacctgcccgacggcatcgtgggcttcctgcgctcgcgtattctgcatcgc
cgccgcacgctttcggtctcggccacgcaagtcgacgaatcggccggcggcgacaccgat
ccggtgctcatggcggcggcaagcggtccggacgaactgctcaaggtgcgccaattgctc
atgcagttcgacggcctcaaggcactcaaccaggtggatctcaccgtcaggcgcggcacg
atccatgggctgatcggcccgaatggatcgggcaagagcaccatgatgaacgtgctcacg
ggcatttacgtgccgaccgccggcagcatcgagtttgcgggacagtcgctcgcgggccgc
acgtcgtcggacatcgcgctctcgggcgtggcgcgcacgttccagaacgtgcagttgttc
ggagaaatgacggcgctcgagaacgtgctcgtcgggctgcaccatacgttcgcttccacg
ctggtcgacgtgtcgctgcgattgccgcgctacaagcgcgaggaaaccggggcccgggcg
cgggcgatgcgattgctggagttcgtggggctggcttcgctggccgacgaggaagcgcgc
aacctgccgtacggcaagcagcgtcttctggagatcgcgcgcgcgttggcgctcgatccg
cgcctgttgctgctcgacgaaccggcggccggcctgaccgcgccggacattcgcgagttg
ctggcgatcattcgcaagattcgcgaccacggcatcacggtcattctcatcgagcaccac
atggacgtggtgatgagcacctgccagaccgtgtcggtcctggacttcgggcagaagatc
gccgaagggctcccggcacagatccaggccgacgagaaagtgatcgaagcgtatctgggc
ggcgcatcgacgacgcactga
DBGET
integrated database retrieval system
