KEGG   Pandoraea pnomenusa 3kgm: U875_12570
Entry
U875_12570        CDS       T02936                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ppk  Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:ppk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppk03032]
    U875_12570
   03036 Chromosome and associated proteins [BR:ppk03036]
    U875_12570
   03400 DNA repair and recombination proteins [BR:ppk03400]
    U875_12570
DNA replication proteins [BR:ppk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    U875_12570
Chromosome and associated proteins [BR:ppk03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    U875_12570
DNA repair and recombination proteins [BR:ppk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      U875_12570
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: AHB06104
LinkDB
Position
2754402..2754680
AA seq 92 aa
MNKQELIDAVAGATGASKAQTGETIDTLIEVIKKAVAKGDTVQLIGFGSFGSGKRAARTG
RNPKTGEAIKIPAAKTVKFTAGKAFKDAVNKK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaacaggaactgatcgacgccgtcgccggcgctacgggtgccagcaaggctcaa
accggcgagaccatcgatacgctgatcgaggttatcaagaaagccgtcgccaagggtgat
acggttcagttgatcggcttcggctcgttcggttcgggcaagcgtgccgcgcgtaccggc
cgcaacccgaagaccggcgaagcgatcaagatcccggccgccaagaccgtgaagttcacg
gctggcaaggcgttcaaggacgctgtgaacaagaagtaa

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